Search Results - Ram Samudrala

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  1. 1

    Multiscale Virtual Screening Optimization for Shotgun Drug Repurposing Using the CANDO Platform by Matthew L. Hudson, Ram Samudrala

    Published in Molecules (2021-04-01)
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  2. 2

    Effective holistic characterization of small molecule effects using heterogeneous biological networks by William Mangione, Zackary Falls, Ram Samudrala

    Published in Frontiers in Pharmacology (2023-04-01)
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  3. 3

    A Deep-Learning Proteomic-Scale Approach for Drug Design by Brennan Overhoff, Zackary Falls, William Mangione, Ram Samudrala

    Published in Pharmaceuticals (2021-12-01)
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  4. 4

    The enzymatic and metabolic capabilities of early life. by Aaron David Goldman, John A Baross, Ram Samudrala

    Published in PLoS ONE (2012-01-01)
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  5. 5

    352 Computational methods for predicting drug combinations for targeting KRAS mutations relevant to non-small cell lung cancer by Liana Bruggemann, Zackary Falls, William Mangione, Supriya Mahajan, Ram Samudrala

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  6. 6

    Protein meta-functional signatures from combining sequence, structure, evolution, and amino acid property information. by Kai Wang, Jeremy A Horst, Gong Cheng, David C Nickle, Ram Samudrala

    Published in PLoS Computational Biology (2008-09-01)
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  7. 7

    Correction: Distal Effect of Amino Acid Substitutions in CYP2C9 Polymorphic Variants Causes Differences in Interatomic Interactions against -Warfarin. by Panida Lertkiatmongkol, Anunchai Assawamakin, George White, Gaurav Chopra, Pornpimol Rongnoparut, Ram Samudrala, Sissades Tongsima

    Published in PLoS ONE (2013-01-01)
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  8. 8

    Identifying Protein Features and Pathways Responsible for Toxicity Using Machine Learning and Tox21: Implications for Predictive Toxicology by Lama Moukheiber, William Mangione, Mira Moukheiber, Saeed Maleki, Zackary Falls, Mingchen Gao, Ram Samudrala

    Published in Molecules (2022-05-01)
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  9. 9

    Distal effect of amino acid substitutions in CYP2C9 polymorphic variants causes differences in interatomic interactions against (S)-warfarin. by Panida Lertkiatmongkol, Anunchai Assawamakin, George White, Gaurav Chopra, Pornpimol Rongnoparut, Ram Samudrala, Sissades Tongsima

    Published in PLoS ONE (2013-01-01)
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  10. 10

    The implications of APOBEC3-mediated C-to-U RNA editing for human disease by Melissa Van Norden, Zackary Falls, Sapan Mandloi, Brahm H. Segal, Bora E. Baysal, Ram Samudrala, Peter L. Elkin

    Published in Communications Biology (2024-05-01)
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  11. 11

    Proteomic Network Analysis of Bronchoalveolar Lavage Fluid in Ex-Smokers to Discover Implicated Protein Targets and Novel Drug Treatments for Chronic Obstructive Pulmonary Disease by Manoj J. Mammen, Chengjian Tu, Matthew C. Morris, Spencer Richman, William Mangione, Zackary Falls, Jun Qu, Gordon Broderick, Sanjay Sethi, Ram Samudrala

    Published in Pharmaceuticals (2022-05-01)
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  12. 12

    Accurate informatic modeling of tooth enamel pellicle interactions by training substitution matrices with Mat4Pep by Jeremy Horst Keeper, Jeremy Horst Keeper, Jong Seto, Jong Seto, Jong Seto, Ersin Emre Oren, Orapin V. Horst, Ling-Hong Hung, Ram Samudrala

    Published in Frontiers in Materials (2024-12-01)
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  13. 13

    Structural optimization and de novo design of dengue virus entry inhibitory peptides. by Joshua M Costin, Ekachai Jenwitheesuk, Shee-Mei Lok, Elizabeth Hunsperger, Kelly A Conrads, Krystal A Fontaine, Craig R Rees, Michael G Rossmann, Sharon Isern, Ram Samudrala, Scott F Michael

    Published in PLoS Neglected Tropical Diseases (2010-06-01)
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