Search Results - Rick Stevens

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  1. 1

    TULIP: An RNA-seq-based Primary Tumor Type Prediction Tool Using Convolutional Neural Networks by Sara Jones, Matthew Beyers, Maulik Shukla, Fangfang Xia, Thomas Brettin, Rick Stevens, M Ryan Weil, Satishkumar Ranganathan Ganakammal

    Published in Cancer Informatics (2022-12-01)
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  2. 2

    AI Meets Exascale Computing: Advancing Cancer Research With Large-Scale High Performance Computing by Tanmoy Bhattacharya, Thomas Brettin, James H. Doroshow, Yvonne A. Evrard, Emily J. Greenspan, Amy L. Gryshuk, Thuc T. Hoang, Carolyn B. Vea Lauzon, Dwight Nissley, Lynne Penberthy, Eric Stahlberg, Rick Stevens, Rick Stevens, Fred Streitz, Georgia Tourassi, Fangfang Xia, George Zaki

    Published in Frontiers in Oncology (2019-10-01)
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  3. 3

    Early detection of emerging SARS-CoV-2 variants of interest for experimental evaluation by Zachary S. Wallace, Zachary S. Wallace, James Davis, James Davis, Anna Maria Niewiadomska, Robert D. Olson, Robert D. Olson, Maulik Shukla, Maulik Shukla, Rick Stevens, Rick Stevens, Yun Zhang, Christian M. Zmasek, Richard H. Scheuermann, Richard H. Scheuermann, Richard H. Scheuermann, Richard H. Scheuermann

    Published in Frontiers in Bioinformatics (2022-10-01)
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  4. 4

    Analysis of the ARTIC Version 3 and Version 4 SARS-CoV-2 Primers and Their Impact on the Detection of the G142D Amino Acid Substitution in the Spike Protein by James J. Davis, S. Wesley Long, Paul A. Christensen, Randall J. Olsen, Robert Olson, Maulik Shukla, Sishir Subedi, Rick Stevens, James M. Musser

    Published in Microbiology Spectrum (2021-12-01)
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  5. 5

    Engineering of increased L-Threonine production in bacteria by combinatorial cloning and machine learning by Paul Hanke, Bruce Parrello, Olga Vasieva, Chase Akins, Philippe Chlenski, Gyorgy Babnigg, Chris Henry, Fatima Foflonker, Thomas Brettin, Dionysios Antonopoulos, Rick Stevens, Michael Fonstein

    Published in Metabolic Engineering Communications (2023-12-01)
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  6. 6

    AI-accelerated protein-ligand docking for SARS-CoV-2 is 100-fold faster with no significant change in detection by Austin Clyde, Xuefeng Liu, Thomas Brettin, Hyunseung Yoo, Alexander Partin, Yadu Babuji, Ben Blaiszik, Jamaludin Mohd-Yusof, Andre Merzky, Matteo Turilli, Shantenu Jha, Arvind Ramanathan, Rick Stevens

    Published in Scientific Reports (2023-02-01)
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  7. 7

    CANDLE/Supervisor: a workflow framework for machine learning applied to cancer research by Justin M. Wozniak, Rajeev Jain, Prasanna Balaprakash, Jonathan Ozik, Nicholson T. Collier, John Bauer, Fangfang Xia, Thomas Brettin, Rick Stevens, Jamaludin Mohd-Yusof, Cristina Garcia Cardona, Brian Van Essen, Matthew Baughman

    Published in BMC Bioinformatics (2018-12-01)
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  8. 8

    Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains. by Nikos C Kyrpides, Philip Hugenholtz, Jonathan A Eisen, Tanja Woyke, Markus Göker, Charles T Parker, Rudolf Amann, Brian J Beck, Patrick S G Chain, Jongsik Chun, Rita R Colwell, Antoine Danchin, Peter Dawyndt, Tom Dedeurwaerdere, Edward F DeLong, John C Detter, Paul De Vos, Timothy J Donohue, Xiu-Zhu Dong, Dusko S Ehrlich, Claire Fraser, Richard Gibbs, Jack Gilbert, Paul Gilna, Frank Oliver Glöckner, Janet K Jansson, Jay D Keasling, Rob Knight, David Labeda, Alla Lapidus, Jung-Sook Lee, Wen-Jun Li, Juncai Ma, Victor Markowitz, Edward R B Moore, Mark Morrison, Folker Meyer, Karen E Nelson, Moriya Ohkuma, Christos A Ouzounis, Norman Pace, Julian Parkhill, Nan Qin, Ramon Rossello-Mora, Johannes Sikorski, David Smith, Mitch Sogin, Rick Stevens, Uli Stingl, Ken-Ichiro Suzuki, Dorothea Taylor, Jim M Tiedje, Brian Tindall, Michael Wagner, George Weinstock, Jean Weissenbach, Owen White, Jun Wang, Lixin Zhang, Yu-Guang Zhou, Dawn Field, William B Whitman, George M Garrity, Hans-Peter Klenk

    Published in PLoS Biology (2014-08-01)
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