Search Results - Ron O. Dror

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  1. 1

    How accurately can one predict drug binding modes using AlphaFold models? by Masha Karelina, Joseph J Noh, Ron O Dror

    Published in eLife (2023-12-01)
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  2. 2

    Evaluating the effects of cutoffs and treatment of long-range electrostatics in protein folding simulations. by Stefano Piana, Kresten Lindorff-Larsen, Robert M Dirks, John K Salmon, Ron O Dror, David E Shaw

    Published in PLoS ONE (2012-01-01)
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  3. 3

    Geometric Deep Learning for Structure-Based Ligand Design by Alexander S. Powers, Helen H. Yu, Patricia Suriana, Rohan V. Koodli, Tianyu Lu, Joseph M. Paggi, Ron O. Dror

    Published in ACS Central Science (2023-11-01)
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  4. 4

    Simple biochemical features underlie transcriptional activation domain diversity and dynamic, fuzzy binding to Mediator by Adrian L Sanborn, Benjamin T Yeh, Jordan T Feigerle, Cynthia V Hao, Raphael JL Townshend, Erez Lieberman Aiden, Ron O Dror, Roger D Kornberg

    Published in eLife (2021-04-01)
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  5. 5

    CryoEM structures of the human CLC-2 voltage-gated chloride channel reveal a ball-and-chain gating mechanism by Mengyuan Xu, Torben Neelands, Alexander S Powers, Yan Liu, Steven D Miller, Grigore D Pintilie, J Du Bois, Ron O Dror, Wah Chiu, Merritt Maduke

    Published in eLife (2024-02-01)
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  6. 6

    A non-canonical mechanism of GPCR activation by Alexander S. Powers, Aasma Khan, Joseph M. Paggi, Naomi R. Latorraca, Sarah Souza, Jerry Di Salvo, Jun Lu, Stephen M. Soisson, Jennifer M. Johnston, Adam B. Weinglass, Ron O. Dror

    Published in Nature Communications (2024-11-01)
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  7. 7

    Structural basis for activation of CB1 by an endocannabinoid analog by Kaavya Krishna Kumar, Michael J. Robertson, Elina Thadhani, Haoqing Wang, Carl-Mikael Suomivuori, Alexander S. Powers, Lipin Ji, Spyros P. Nikas, Ron O. Dror, Asuka Inoue, Alexandros Makriyannis, Georgios Skiniotis, Brian Kobilka

    Published in Nature Communications (2023-05-01)
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  8. 8

    Author Correction: Constrained catecholamines gain β2AR selectivity through allosteric effects on pocket dynamics by Xinyu Xu, Jeremy Shonberg, Jonas Kaindl, Mary J. Clark, Anne Stößel, Luis Maul, Daniel Mayer, Harald Hübner, Kunio Hirata, A. J. Venkatakrishnan, Ron O. Dror, Brian K. Kobilka, Roger K. Sunahara, Xiangyu Liu, Peter Gmeiner

    Published in Nature Communications (2023-05-01)
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  9. 9

    Molecular mechanism of biased signaling at the kappa opioid receptor by Amal El Daibani, Joseph M. Paggi, Kuglae Kim, Yianni D. Laloudakis, Petr Popov, Sarah M. Bernhard, Brian E. Krumm, Reid H. J. Olsen, Jeffrey Diberto, F. Ivy Carroll, Vsevolod Katritch, Bernhard Wünsch, Ron O. Dror, Tao Che

    Published in Nature Communications (2023-03-01)
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  10. 10

    Xanomeline displays concomitant orthosteric and allosteric binding modes at the M4 mAChR by Wessel A. C. Burger, Vi Pham, Ziva Vuckovic, Alexander S. Powers, Jesse I. Mobbs, Yianni Laloudakis, Alisa Glukhova, Denise Wootten, Andrew B. Tobin, Patrick M. Sexton, Steven M. Paul, Christian C. Felder, Radostin Danev, Ron O. Dror, Arthur Christopoulos, Celine Valant, David M. Thal

    Published in Nature Communications (2023-09-01)
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  11. 11

    Structural insights into lipid chain-length selectivity and allosteric regulation of FFA2 by Mai Kugawa, Kouki Kawakami, Ryoji Kise, Carl-Mikael Suomivuori, Masaki Tsujimura, Kazuhiro Kobayashi, Asato Kojima, Wakana J. Inoue, Masahiro Fukuda, Toshiki E. Matsui, Ayami Fukunaga, Junki Koyanagi, Suhyang Kim, Hisako Ikeda, Keitaro Yamashita, Keisuke Saito, Hiroshi Ishikita, Ron O. Dror, Asuka Inoue, Hideaki E. Kato

    Published in Nature Communications (2025-03-01)
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  12. 12

    Signaling Modulation Mediated by Ligand Water Interactions with the Sodium Site at μOR by Rohini S. Ople, Nokomis Ramos-Gonzalez, Qiongyu Li, Briana L. Sobecks, Deniz Aydin, Alexander S. Powers, Abdelfattah Faouzi, Benjamin J. Polacco, Sarah M. Bernhard, Kevin Appourchaux, Sashrik Sribhashyam, Shainnel O. Eans, Bowen A. Tsai, Ron O. Dror, Balazs R. Varga, Haoqing Wang, Ruth Hüttenhain, Jay P. McLaughlin, Susruta Majumdar

    Published in ACS Central Science (2024-07-01)
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