Search Results - Ruibin Xi

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  1. 1

    Comprehensive analysis of neoantigens derived from structural variation across whole genomes from 2528 tumors by Yang Shi, Biyang Jing, Ruibin Xi

    Published in Genome Biology (2023-07-01)
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  2. 2

    Directly selecting cell-type marker genes for single-cell clustering analyses by Zihao Chen, Changhu Wang, Siyuan Huang, Yang Shi, Ruibin Xi

    Published in Cell Reports: Methods (2024-07-01)
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  3. 3

    Somatic mutations in renal cell carcinomas from Chinese patients revealed by targeted gene panel sequencing and their associations with prognosis and PD-L1 expression by Jie Wang, Jianzhong Xi, Hanshuo Zhang, Juan Li, Yuchao Xia, Ruibin Xi, Zhijun Xi

    Published in Cancer Communications (2019-06-01)
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  4. 4

    De novo identification of expressed cancer somatic mutations from single-cell RNA sequencing data by Tianyun Zhang, Hanying Jia, Tairan Song, Lin Lv, Doga C. Gulhan, Haishuai Wang, Wei Guo, Ruibin Xi, Hongshan Guo, Ning Shen

    Published in Genome Medicine (2023-12-01)
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  5. 5

    TAGET: a toolkit for analyzing full-length transcripts from long-read sequencing by Yuchao Xia, Zijie Jin, Chengsheng Zhang, Linkun Ouyang, Yuhao Dong, Juan Li, Lvze Guo, Biyang Jing, Yang Shi, Susheng Miao, Ruibin Xi

    Published in Nature Communications (2023-09-01)
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  6. 6

    Identification of eight genes associated with recurrent patellar dislocation by Zijie Xu, Siyuan Huang, Yifan Song, Chao Xu, Hongyu Yan, Ouyang Linkun, Bo Lv, Fuzhen Yuan, Bingbing Xu, Haijun Wang, Ruibin Xi, Jia-Kuo Yu

    Published in iScience (2024-05-01)
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  7. 7

    High-resolution detection of copy number alterations in single cells with HiScanner by Yifan Zhao, Lovelace J. Luquette, Alexander D. Veit, Xiaochen Wang, Ruibin Xi, Vinayak V. Viswanadham, Yuwei Zhang, Diane D. Shao, Christopher A. Walsh, Hong Wei Yang, Mark D. Johnson, Peter J. Park

    Published in Nature Communications (2025-07-01)
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  8. 8

    Evolutionary dependency of cancer mutations in gene pairs inferred by nonsynonymous-synonymous mutation ratios by Dong-Jin Han, Sunmin Kim, Seo-Young Lee, Youngbeen Moon, Su Jung Kang, Jinseon Yoo, Hye Young Jeong, Hae Jin Cho, Jeong Yang Jeon, Byeong Chang Sim, Jaehoon Kim, Seungho Lee, Ruibin Xi, Tae-Min Kim

    Published in Genome Medicine (2024-08-01)
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  9. 9

    Author Correction: Genomic footprints of activated telomere maintenance mechanisms in cancer by Lina Sieverling, Chen Hong, Sandra D. Koser, Philip Ginsbach, Kortine Kleinheinz, Barbara Hutter, Delia M. Braun, Isidro Cortés-Ciriano, Ruibin Xi, Rolf Kabbe, Peter J. Park, Roland Eils, Matthias Schlesner, PCAWG-Structural Variation Working Group, Benedikt Brors, Karsten Rippe, David T. W. Jones, Lars Feuerbach, PCAWG Consortium

    Published in Nature Communications (2022-12-01)
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  10. 10

    A Pan-Cancer Compendium of Genes Deregulated by Somatic Genomic Rearrangement across More Than 1,400 Cases by Yiqun Zhang, Lixing Yang, Melanie Kucherlapati, Fengju Chen, Angela Hadjipanayis, Angeliki Pantazi, Christopher A. Bristow, Eunjung A. Lee, Harshad S. Mahadeshwar, Jiabin Tang, Jianhua Zhang, Sahil Seth, Semin Lee, Xiaojia Ren, Xingzhi Song, Huandong Sun, Jonathan Seidman, Lovelace J. Luquette, Ruibin Xi, Lynda Chin, Alexei Protopopov, Wei Li, Peter J. Park, Raju Kucherlapati, Chad J. Creighton

    Published in Cell Reports (2018-07-01)
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