Search Results - T. Beechem
- Showing 1 - 17 results of 17
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211 Spatial whole transcriptome profiling of human normal liver and HCC uncovers unique insights into metabolic zonation by Liang Zhang, Yan Liang, Xia Li, Nan Wang, Joseph M Beechem, Charlie Glaser, Megan Vandenberg, Zhiyong Ding
Published in Journal for ImmunoTherapy of Cancer (2023-11-01)Article -
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Modeling bi-modality improves characterization of cell cycle on gene expression in single cells. by Andrew McDavid, Lucas Dennis, Patrick Danaher, Greg Finak, Michael Krouse, Alice Wang, Philippa Webster, Joseph Beechem, Raphael Gottardo
Published in PLoS Computational Biology (2014-07-01)Get full text
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86 Reveal spatial signatures of tumor microenvironment and oncogenic pathways using 6,000-plex single-cell spatial molecular imaging on FFPE tissue by Patrick Danaher, Joseph Beechem, Jason Reeves, Shanshan He, Michael Rhodes, Mark Gregory, Michael Patrick, Julian Preciado, David Kroeppler, Olivia Ho-shing, Haiyan Zhai
Published in Journal for ImmunoTherapy of Cancer (2023-11-01)Article -
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CTLA-4 blockade and interferon-α induce proinflammatory transcriptional changes in the tumor immune landscape that correlate with pathologic response in melanoma. by Arjun Khunger, Erin Piazza, Sarah Warren, Thomas H Smith, Xing Ren, Andrew White, Nathan Elliott, Alessandra Cesano, Joseph M Beechem, John M Kirkwood, Ahmad A Tarhini
Published in PLoS ONE (2021-01-01)Get full text
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113 A single-cell spatially resolved atlas of immune-mediated control of lung adenocarcinoma by Joseph Beechem, Shanshan He, Silvio Bicciato, Michael Patrick, Margaret Hoang, Tito Panciera, Francesca Zanconato, Michelangelo Cordenonsi, Mattia Forcato, Giada Vanni, Julian Preciado, Saskia Ilcisin, Katrina Raay, Stefano Piccolo
Published in Journal for ImmunoTherapy of Cancer (2023-11-01)Article -
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InSituCor: exploring spatially correlated genes conditional on the cell type landscape by Patrick Danaher, Dan McGuire, Lidan Wu, Michael Patrick, David Kroeppler, Haiyan Zhai, Deniz G. Olgun, Dennis Gong, Jingyi Cao, William L. Hwang, Joachim Schmid, Joseph M. Beechem
Published in Genome Biology (2025-04-01)Get full text
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Phase Transformations Driving Biaxial Stress Reduction During Wake‐Up of Ferroelectric Hafnium Zirconium Oxide Thin Films by Samantha T. Jaszewski, Shelby S. Fields, Sebastian Calderon, Benjamin L. Aronson, Thomas E. Beechem, Kyle P. Kelley, Casey Zhang, Megan K. Lenox, Ian A. Brummel, Elizabeth C. Dickey, Jon F. Ihlefeld
Published in Advanced Electronic Materials (2024-11-01)Get full text
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120 Human immuno-oncology proteome atlas enables a holistic proteomic approach for spatial biology discovery in FFPE tissues by Mark Conner, Joseph Beechem, Gary Geiss, Eduardo Ignacio, Alyssa Rosenbloom, Shilah Bonnett, Brian Filanoski, Rhonda Meredith, Hye Son Yi, Erin Piazza, Christine Kang, Lesley Isgur, Margaret Hoang, Lori Hamanishi, Nadine Nelson, Michael Prater
Published in Journal for ImmunoTherapy of Cancer (2023-11-01)Article -
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207 The spatially-resolved proteomic atlas of the tumor immune architecture of HER2-positive breast cancer and response to neoadjuvant anti-HER2 therapy-based chemotherapy by Yi Liu, Mark Conner, Joseph Beechem, Gary Geiss, Saranya Chumsri, Alyssa Rosenbloom, Shilah Bonnett, Brian Filanoski, Rhonda Meredith, Erin Piazza, Christine Kang, Jennifer Kachergus, Ji Shi, Yaohua Ma, Lesley Isgur, Margaret Hoang, EA Thompson
Published in Journal for ImmunoTherapy of Cancer (2023-11-01)Article -
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The development of a high-plex spatial proteomic methodology for the characterisation of the head and neck tumour microenvironment by Chin Wee Tan, Naomi Berrell, Meg L. Donovan, James Monkman, Clara Lawler, Habib Sadeghirad, Vahid Yaghoubi Naei, Jinjin Chen, Alyssa Rossenbloom, Shilah Bonnett, Mark Conner, Brian Filanoski, Christine Kang, Joseph M. Beechem, John F. Fraser, Catherine Barnett, Rahul Ladwa, Brett G. M. Hughes, Arutha Kulasinghe
Published in npj Precision Oncology (2025-06-01)Get full text
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Unidirectional ray polaritons in twisted asymmetric stacks by J. Álvarez-Cuervo, M. Obst, S. Dixit, G. Carini, A. I. F. Tresguerres-Mata, C. Lanza, E. Terán-García, G. Álvarez-Pérez, L. F. Álvarez-Tomillo, K. Diaz-Granados, R. Kowalski, A. S. Senerath, N. S. Mueller, L. Herrer, J. M. De Teresa, S. Wasserroth, J. M. Klopf, T. Beechem, M. Wolf, L. M. Eng, T. G. Folland, A. Tarazaga Martín-Luengo, J. Martín-Sánchez, S. C. Kehr, A. Y. Nikitin, J. D. Caldwell, P. Alonso-González, A. Paarmann
Published in Nature Communications (2024-10-01)Get full text
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A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients by Yered Pita-Juarez, Dimitra Karagkouni, Nikolaos Kalavros, Johannes C. Melms, Sebastian Niezen, Toni M. Delorey, Adam L. Essene, Olga R. Brook, Deepti Pant, Disha Skelton-Badlani, Pourya Naderi, Pinzhu Huang, Liuliu Pan, Tyler Hether, Tallulah S. Andrews, Carly G. K. Ziegler, Jason Reeves, Andriy Myloserdnyy, Rachel Chen, Andy Nam, Stefan Phelan, Yan Liang, Mark Gregory, Shanshan He, Michael Patrick, Tushar Rane, Aster Wardhani, Amit Dipak Amin, Jana Biermann, Hanina Hibshoosh, Molly Veregge, Zachary Kramer, Christopher Jacobs, Yusuf Yalcin, Devan Phillips, Michal Slyper, Ayshwarya Subramanian, Orr Ashenberg, Zohar Bloom-Ackermann, Victoria M. Tran, James Gomez, Alexander Sturm, Shuting Zhang, Stephen J. Fleming, Sarah Warren, Joseph Beechem, Deborah Hung, Mehrtash Babadi, Robert F. Padera, Sonya A. MacParland, Gary D. Bader, Nasser Imad, Isaac H. Solomon, Eric Miller, Stefan Riedel, Caroline B. M. Porter, Alexandra-Chloé Villani, Linus T.-Y. Tsai, Winston Hide, Gyongyi Szabo, Jonathan Hecht, Orit Rozenblatt-Rosen, Alex K. Shalek, Benjamin Izar, Aviv Regev, Yury V. Popov, Z. Gordon Jiang, Ioannis S. Vlachos
Published in Genome Biology (2025-03-01)Get full text
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