Search Results - Theodore J. Perkins

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  1. 1

    Empirical Bayes single nucleotide variant-calling for next-generation sequencing data by Ali Karimnezhad, Theodore J. Perkins

    Published in Scientific Reports (2024-01-01)
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  2. 2

    Strategies for cellular decision‐making by Theodore J Perkins, Peter S Swain

    Published in Molecular Systems Biology (2009-11-01)
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  3. 3

    Identifying transcription factors with cell-type specific DNA binding signatures by Aseel Awdeh, Marcel Turcotte, Theodore J. Perkins

    Published in BMC Genomics (2024-10-01)
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  4. 4

    Differential equation modeling of cell population dynamics in skeletal muscle regeneration from single-cell transcriptomic data. by Renad Al-Ghazawi, Hassan Lezzeik, Xiaojian Shao, Theodore J Perkins

    Published in PLoS Computational Biology (2025-10-01)
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  5. 5

    Bayesian Correlation Analysis for Sequence Count Data. by Daniel Sánchez-Taltavull, Parameswaran Ramachandran, Nelson Lau, Theodore J Perkins

    Published in PLoS ONE (2016-01-01)
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  6. 6

    VNC-Dist: A machine learning-based semi-automated pipeline for quantification of neuronal position in the C. elegans ventral nerve cord by Saber Saharkhiz, Wesley Chan, Chloe B. Kirezi, Mearhyn Petite, Tony Roenspies, Theodore J. Perkins, Antonio Colavita

    Published in PLoS ONE (2025-01-01)
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  7. 7

    VNC-Dist: A machine learning-based semi-automated pipeline for quantification of neuronal position in the C. elegans ventral nerve cord. by Saber Saharkhiz, Wesley Chan, Chloe B Kirezi, Mearhyn Petite, Tony Roenspies, Theodore J Perkins, Antonio Colavita

    Published in PLoS ONE (2025-01-01)
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  8. 8

    Induction of Activating Transcription Factor 3 Is Associated with Cisplatin Responsiveness in Non–Small Cell Lung Carcinoma Cells by Jair Bar, Mohamed S. Hasim, Tabassom Baghai, Nima Niknejad, Theodore J. Perkins, David J. Stewart, Harmanjatinder S. Sekhon, Patrick J. Villeneuve, Jim Dimitroulakos

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  9. 9

    Costs of Next-Generation Sequencing Assays in Non-Small Cell Lung Cancer: A Micro-Costing Study by Srishti Kumar, Alexandria Bennett, Pearl A. Campbell, Gareth Palidwor, Bryan Lo, Theodore J. Perkins, Surapon Nochaiwong, Harmanjatinder S. Sekhon, David J. Stewart, Kednapa Thavorn

    Published in Current Oncology (2022-07-01)
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  10. 10

    Transcriptomically Guided Mesendoderm Induction of Human Pluripotent Stem Cells Using a Systematically Defined Culture Scheme by Richard L. Carpenedo, Sarah Y. Kwon, R. Matthew Tanner, Julien Yockell-Lelièvre, Chandarong Choey, Carole Doré, Mirabelle Ho, Duncan J. Stewart, Theodore J. Perkins, William L. Stanford

    Published in Stem Cell Reports (2019-12-01)
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  11. 11

    Epigenetic Activation of Pro-angiogenic Signaling Pathways in Human Endothelial Progenitors Increases Vasculogenesis by Sylvain Fraineau, Carmen G. Palii, Brian McNeill, Morten Ritso, William C. Shelley, Nutan Prasain, Alphonse Chu, Elodie Vion, Kristy Rieck, Sharmin Nilufar, Theodore J. Perkins, Michael A. Rudnicki, David S. Allan, Mervin C. Yoder, Erik J. Suuronen, Marjorie Brand

    Published in Stem Cell Reports (2017-11-01)
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