NSDPY: A python package to download DNA sequences from NCBI
Downloading large batches of DNA sequences can be useful to create custom databases containing for example sequences of a particular genomic region or a group of organisms. These sequences can be found on NCBI databases and accessed via a web browser (GUI) or directly via NCBI API. While the GUI is...
| Published in: | SoftwareX |
|---|---|
| Main Authors: | Raphaël Hebert, Emese Meglécz |
| Format: | Article |
| Language: | English |
| Published: |
Elsevier
2022-06-01
|
| Subjects: | |
| Online Access: | http://www.sciencedirect.com/science/article/pii/S235271102200036X |
Similar Items
Python Programming in PyPI for Translational Medicine
by: Yoshiyasu Takefuji
Published: (2021-11-01)
by: Yoshiyasu Takefuji
Published: (2021-11-01)
Set Operations in Python for Translational Medicine
by: Yoshiyasu Takefuji
Published: (2022-04-01)
by: Yoshiyasu Takefuji
Published: (2022-04-01)
SCORECOVID: A Python Package Index for scoring the individual policies against COVID-19
by: Yoshiyasu Takefuji
Published: (2021-11-01)
by: Yoshiyasu Takefuji
Published: (2021-11-01)
Downloading Web Pages with Python
by: William J. Turkel, et al.
Published: (2012-07-01)
by: William J. Turkel, et al.
Published: (2012-07-01)
Downloading Multiple Records Using Query Strings
by: Adam Crymble
Published: (2012-11-01)
by: Adam Crymble
Published: (2012-11-01)
CDSupdate: A meta-interface for ERA5 download request, management and storage
by: Andreia N.S. Hisi, et al.
Published: (2024-12-01)
by: Andreia N.S. Hisi, et al.
Published: (2024-12-01)
Design and application of automatic calibration data download software for early warning network
by: Rongshuai He, et al.
Published: (2025-04-01)
by: Rongshuai He, et al.
Published: (2025-04-01)
“Plutchik”: artificial intelligence chatbot for searching NCBI databases
by: Shannon Bohle
Published: (2018-10-01)
by: Shannon Bohle
Published: (2018-10-01)
PyOPAsolver: A python based tool for ordinal priority approach operations and normalization
by: Abdesadik Bendarag, et al.
Published: (2022-12-01)
by: Abdesadik Bendarag, et al.
Published: (2022-12-01)
Practical Evaluation of Multi-Source Coded Downloads
by: Patrik J. Braun, et al.
Published: (2019-01-01)
by: Patrik J. Braun, et al.
Published: (2019-01-01)
PCSIM: a parallel simulation environment for neural circuits fully integrated with Python
by: Dejan Pecevski, et al.
Published: (2009-05-01)
by: Dejan Pecevski, et al.
Published: (2009-05-01)
2D Simplified Wildfire Spreading Model in Python: From NumPy to CuPy
by: Daniel San Martin, et al.
Published: (2023-05-01)
by: Daniel San Martin, et al.
Published: (2023-05-01)
A Cooperative Downloading Method for VANET Using Distributed Fountain Code
by: Jianhang Liu, et al.
Published: (2016-10-01)
by: Jianhang Liu, et al.
Published: (2016-10-01)
Python approach for using homotopy perturbation method to investigate heat transfer problems
by: Payam Jalili, et al.
Published: (2024-02-01)
by: Payam Jalili, et al.
Published: (2024-02-01)
Download… Une courte histoire de la dématérialisation des jeux vidéo
by: Alexis Blanchet
Published: (2012-08-01)
by: Alexis Blanchet
Published: (2012-08-01)
PyChelator: a Python-based Colab and web application for metal chelator calculations
by: Emrulla Spahiu, et al.
Published: (2024-07-01)
by: Emrulla Spahiu, et al.
Published: (2024-07-01)
Determinants of Downloads as Demand for Hybrid Journals
by: Sumiko Asai
Published: (2024-08-01)
by: Sumiko Asai
Published: (2024-08-01)
Establishing a novel modeling tool: a python-based interface for a neuromorphic hardware system
by: Daniel Brüderle, et al.
Published: (2009-06-01)
by: Daniel Brüderle, et al.
Published: (2009-06-01)
Downloaded Worksheets: A Learning Activity to Enhance Mathematical Level
by: Elmer C. Zarate, et al.
Published: (2022-03-01)
by: Elmer C. Zarate, et al.
Published: (2022-03-01)
Legal Protection for Film Copyright Holders Against Illegal Downloading and Streaming Activities on the Internet
by: Muhammad Anugrah
Published: (2023-10-01)
by: Muhammad Anugrah
Published: (2023-10-01)
GTdownloader: A Python Package to Download, Visualize, and Export Georeferenced Tweets From the Twitter API
by: Juan Acosta-Sequeda, et al.
Published: (2023-06-01)
by: Juan Acosta-Sequeda, et al.
Published: (2023-06-01)
PyVisVue3D3: Python visualization from hierarchy tree to call graph
by: Chunfang Li, et al.
Published: (2024-05-01)
by: Chunfang Li, et al.
Published: (2024-05-01)
OpenSeesPyView: Python programming-based visualization and post-processing tool for OpenSeesPy
by: Junjun Guo, et al.
Published: (2023-02-01)
by: Junjun Guo, et al.
Published: (2023-02-01)
Journal Download Factor: A Composite Indicator of Dissemination, Impact, Knowledge and Information
by: YU Liping
Published: (2023-11-01)
by: YU Liping
Published: (2023-11-01)
Every Track You Take: Analysing the Dynamics of Song and Genre Reception Through Music Downloading
by: Dan Tidhar, et al.
Published: (2014-06-01)
by: Dan Tidhar, et al.
Published: (2014-06-01)
Range Space and Similarity Transformation Using Symbolic Mathematics in Python
by: Chainarong Wisassakwichai, et al.
Published: (2024-01-01)
by: Chainarong Wisassakwichai, et al.
Published: (2024-01-01)
opseestools: A Python library to streamline OpenSeesPy workflows
by: Orlando Arroyo, et al.
Published: (2024-09-01)
by: Orlando Arroyo, et al.
Published: (2024-09-01)
Repressão, adaptação, reinvenção: o download de música como lazer e negócio na internet (2006-2013)
by: Juliana de Alencar Viana, et al.
Published: (2018-04-01)
by: Juliana de Alencar Viana, et al.
Published: (2018-04-01)
Cooperative content downloading scheme based on D2D multicast communications
by: Lianxin YANG, et al.
Published: (2020-11-01)
by: Lianxin YANG, et al.
Published: (2020-11-01)
Research on video streaming media cooperative downloading in vehicular ad hoc network
by: Liang CHEN, et al.
Published: (2019-01-01)
by: Liang CHEN, et al.
Published: (2019-01-01)
Research on video streaming media cooperative downloading in vehicular ad hoc network
by: Liang CHEN, et al.
Published: (2019-01-01)
by: Liang CHEN, et al.
Published: (2019-01-01)
Cooperative content downloading scheme based on D2D multicast communications
by: Lianxin YANG, et al.
Published: (2020-11-01)
by: Lianxin YANG, et al.
Published: (2020-11-01)
Non-intermittent cooperative downloading approach for VANET
by: Yong XIE, et al.
Published: (2016-01-01)
by: Yong XIE, et al.
Published: (2016-01-01)
Non-intermittent cooperative downloading approach for VANET
by: Yong XIE, et al.
Published: (2016-01-01)
by: Yong XIE, et al.
Published: (2016-01-01)
Corrigendum: Reconstruction and Simulation of a Scaffold Model of the Cerebellar Network
by: Stefano Casali, et al.
Published: (2019-07-01)
by: Stefano Casali, et al.
Published: (2019-07-01)
opstool: A Python library for OpenSeesPy analysis automation, streamlined pre- and post-processing, and enhanced data visualization
by: Yexiang Yan, et al.
Published: (2025-05-01)
by: Yexiang Yan, et al.
Published: (2025-05-01)
Making an executable paper with the Python in Heliophysics Community to foster open science and improve reproducibility
by: Shawn Polson, et al.
Published: (2023-03-01)
by: Shawn Polson, et al.
Published: (2023-03-01)
Using AnnoTree to Get More Assignments, Faster, in DIAMOND+MEGAN Microbiome Analysis
by: Anupam Gautam, et al.
Published: (2022-02-01)
by: Anupam Gautam, et al.
Published: (2022-02-01)
A Cooperative Routing Scheme Using Inter-Satellite Links to Assist Data Downloading for LEO Satellite Networks
by: Zijian Yang, et al.
Published: (2022-10-01)
by: Zijian Yang, et al.
Published: (2022-10-01)
Purification and Characterization of Recombinant Levansucrase From Bacillus lichniformans MJ8
by: Mustafa Omar, et al.
Published: (2023-07-01)
by: Mustafa Omar, et al.
Published: (2023-07-01)
Similar Items
-
Python Programming in PyPI for Translational Medicine
by: Yoshiyasu Takefuji
Published: (2021-11-01) -
Set Operations in Python for Translational Medicine
by: Yoshiyasu Takefuji
Published: (2022-04-01) -
SCORECOVID: A Python Package Index for scoring the individual policies against COVID-19
by: Yoshiyasu Takefuji
Published: (2021-11-01) -
Downloading Web Pages with Python
by: William J. Turkel, et al.
Published: (2012-07-01) -
Downloading Multiple Records Using Query Strings
by: Adam Crymble
Published: (2012-11-01)
