CBFA2T3-GLIS2 mediates transcriptional regulation of developmental pathways through a gene regulatory network

Abstract CBFA2T3-GLIS2 is a fusion oncogene found in pediatric acute megakaryoblastic leukemia that is associated with a poor prognosis. We establish a model of CBFA2T3-GLIS2 driven acute megakaryoblastic leukemia that allows the distinction of fusion specific changes from those that reflect the meg...

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الحاوية / القاعدة:Nature Communications
المؤلفون الرئيسيون: Elizabeth A. R. Garfinkle, Pratima Nallagatla, Binay Sahoo, Jinjun Dang, Mohammad Balood, Anitria Cotton, Camryn Franke, Sharnise Mitchell, Taylor Wilson, Tanja A. Gruber
التنسيق: مقال
اللغة:الإنجليزية
منشور في: Nature Portfolio 2024-10-01
الوصول للمادة أونلاين:https://doi.org/10.1038/s41467-024-53158-9
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author Elizabeth A. R. Garfinkle
Pratima Nallagatla
Binay Sahoo
Jinjun Dang
Mohammad Balood
Anitria Cotton
Camryn Franke
Sharnise Mitchell
Taylor Wilson
Tanja A. Gruber
author_facet Elizabeth A. R. Garfinkle
Pratima Nallagatla
Binay Sahoo
Jinjun Dang
Mohammad Balood
Anitria Cotton
Camryn Franke
Sharnise Mitchell
Taylor Wilson
Tanja A. Gruber
author_sort Elizabeth A. R. Garfinkle
collection DOAJ
container_title Nature Communications
description Abstract CBFA2T3-GLIS2 is a fusion oncogene found in pediatric acute megakaryoblastic leukemia that is associated with a poor prognosis. We establish a model of CBFA2T3-GLIS2 driven acute megakaryoblastic leukemia that allows the distinction of fusion specific changes from those that reflect the megakaryoblast lineage of this leukemia. Using this model, we map fusion genome wide binding that in turn imparts the characteristic transcriptional signature. A network of transcription factor genes bound and upregulated by the fusion are found to have downstream effects that result in dysregulated signaling of developmental pathways including NOTCH, Hedgehog, TGFβ, and WNT. Transcriptional regulation is mediated by homo-dimerization and binding of the ETO transcription factor through the nervy homology region 2. Loss of nerve homology region 2 abrogated the development of leukemia, leading to downregulation of JAK/STAT, Hedgehog, and NOTCH transcriptional signatures. These data contribute to the understanding of CBFA2T3-GLIS2 mediated leukemogenesis and identify potential therapeutic vulnerabilities for future studies.
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spelling doaj-art-45c7225d2e02401ea3d4836db5bb3be12025-08-20T01:37:09ZengNature PortfolioNature Communications2041-17232024-10-0115111610.1038/s41467-024-53158-9CBFA2T3-GLIS2 mediates transcriptional regulation of developmental pathways through a gene regulatory networkElizabeth A. R. Garfinkle0Pratima Nallagatla1Binay Sahoo2Jinjun Dang3Mohammad Balood4Anitria Cotton5Camryn Franke6Sharnise Mitchell7Taylor Wilson8Tanja A. Gruber9Department of Pediatrics, Stanford University School of MedicineDepartment of Pediatrics, Stanford University School of MedicineDepartment of Pediatrics, Stanford University School of MedicineDepartment of Pediatrics, Stanford University School of MedicineDepartment of Pediatrics, Stanford University School of MedicineDivision of Experimental Hematology, St. Jude Children’s Research HospitalDepartment of Pediatrics, Stanford University School of MedicineDepartment of Chemical Biology and Therapeutics, St. Jude Children’s Research HospitalDepartment of Immunology, St. Jude Children’s Research HospitalDepartment of Pediatrics, Stanford University School of MedicineAbstract CBFA2T3-GLIS2 is a fusion oncogene found in pediatric acute megakaryoblastic leukemia that is associated with a poor prognosis. We establish a model of CBFA2T3-GLIS2 driven acute megakaryoblastic leukemia that allows the distinction of fusion specific changes from those that reflect the megakaryoblast lineage of this leukemia. Using this model, we map fusion genome wide binding that in turn imparts the characteristic transcriptional signature. A network of transcription factor genes bound and upregulated by the fusion are found to have downstream effects that result in dysregulated signaling of developmental pathways including NOTCH, Hedgehog, TGFβ, and WNT. Transcriptional regulation is mediated by homo-dimerization and binding of the ETO transcription factor through the nervy homology region 2. Loss of nerve homology region 2 abrogated the development of leukemia, leading to downregulation of JAK/STAT, Hedgehog, and NOTCH transcriptional signatures. These data contribute to the understanding of CBFA2T3-GLIS2 mediated leukemogenesis and identify potential therapeutic vulnerabilities for future studies.https://doi.org/10.1038/s41467-024-53158-9
spellingShingle Elizabeth A. R. Garfinkle
Pratima Nallagatla
Binay Sahoo
Jinjun Dang
Mohammad Balood
Anitria Cotton
Camryn Franke
Sharnise Mitchell
Taylor Wilson
Tanja A. Gruber
CBFA2T3-GLIS2 mediates transcriptional regulation of developmental pathways through a gene regulatory network
title CBFA2T3-GLIS2 mediates transcriptional regulation of developmental pathways through a gene regulatory network
title_full CBFA2T3-GLIS2 mediates transcriptional regulation of developmental pathways through a gene regulatory network
title_fullStr CBFA2T3-GLIS2 mediates transcriptional regulation of developmental pathways through a gene regulatory network
title_full_unstemmed CBFA2T3-GLIS2 mediates transcriptional regulation of developmental pathways through a gene regulatory network
title_short CBFA2T3-GLIS2 mediates transcriptional regulation of developmental pathways through a gene regulatory network
title_sort cbfa2t3 glis2 mediates transcriptional regulation of developmental pathways through a gene regulatory network
url https://doi.org/10.1038/s41467-024-53158-9
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