Deep learning methods for high-resolution microscale light field image reconstruction: a survey

Deep learning is progressively emerging as a vital tool for image reconstruction in light field microscopy. The present review provides a comprehensive examination of the latest advancements in light field image reconstruction techniques based on deep learning algorithms. First, the review briefly i...

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Published in:Frontiers in Bioengineering and Biotechnology
Main Authors: Bingzhi Lin, Yuan Tian, Yue Zhang, Zhijing Zhu, Depeng Wang
Format: Article
Language:English
Published: Frontiers Media S.A. 2024-11-01
Subjects:
Online Access:https://www.frontiersin.org/articles/10.3389/fbioe.2024.1500270/full
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author Bingzhi Lin
Yuan Tian
Yue Zhang
Zhijing Zhu
Depeng Wang
author_facet Bingzhi Lin
Yuan Tian
Yue Zhang
Zhijing Zhu
Depeng Wang
author_sort Bingzhi Lin
collection DOAJ
container_title Frontiers in Bioengineering and Biotechnology
description Deep learning is progressively emerging as a vital tool for image reconstruction in light field microscopy. The present review provides a comprehensive examination of the latest advancements in light field image reconstruction techniques based on deep learning algorithms. First, the review briefly introduced the concept of light field and deep learning techniques. Following that, the application of deep learning in light field image reconstruction was discussed. Subsequently, we classified deep learning-based light field microscopy reconstruction algorithms into three types based on the contribution of deep learning, including fully deep learning-based method, deep learning enhanced raw light field image with numerical inversion volumetric reconstruction, and numerical inversion volumetric reconstruction with deep learning enhanced resolution, and comprehensively analyzed the features of each approach. Finally, we discussed several challenges, including deep neural approaches for increasing the accuracy of light field microscopy to predict temporal information, methods for obtaining light field training data, strategies for data enhancement using existing data, and the interpretability of deep neural networks.
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spelling doaj-art-4e1076fa2d6743a7960a80c07aa29f2e2025-08-19T23:30:10ZengFrontiers Media S.A.Frontiers in Bioengineering and Biotechnology2296-41852024-11-011210.3389/fbioe.2024.15002701500270Deep learning methods for high-resolution microscale light field image reconstruction: a surveyBingzhi Lin0Yuan Tian1Yue Zhang2Zhijing Zhu3Depeng Wang4College of Energy and Power Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, ChinaDepartment of Biomedical Engineering, Duke University, Durham, NC, United StatesCollege of Energy and Power Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, ChinaKey Laboratory of Novel Targets and Drug Study for Neural Repair of Zhejiang Province, School of Medicine, Hangzhou City University, Hangzhou, ChinaCollege of Energy and Power Engineering, Nanjing University of Aeronautics and Astronautics, Nanjing, ChinaDeep learning is progressively emerging as a vital tool for image reconstruction in light field microscopy. The present review provides a comprehensive examination of the latest advancements in light field image reconstruction techniques based on deep learning algorithms. First, the review briefly introduced the concept of light field and deep learning techniques. Following that, the application of deep learning in light field image reconstruction was discussed. Subsequently, we classified deep learning-based light field microscopy reconstruction algorithms into three types based on the contribution of deep learning, including fully deep learning-based method, deep learning enhanced raw light field image with numerical inversion volumetric reconstruction, and numerical inversion volumetric reconstruction with deep learning enhanced resolution, and comprehensively analyzed the features of each approach. Finally, we discussed several challenges, including deep neural approaches for increasing the accuracy of light field microscopy to predict temporal information, methods for obtaining light field training data, strategies for data enhancement using existing data, and the interpretability of deep neural networks.https://www.frontiersin.org/articles/10.3389/fbioe.2024.1500270/fulldeep learninglight field microscopylight field imaginghigh resolutionvolumetric reconstruction
spellingShingle Bingzhi Lin
Yuan Tian
Yue Zhang
Zhijing Zhu
Depeng Wang
Deep learning methods for high-resolution microscale light field image reconstruction: a survey
deep learning
light field microscopy
light field imaging
high resolution
volumetric reconstruction
title Deep learning methods for high-resolution microscale light field image reconstruction: a survey
title_full Deep learning methods for high-resolution microscale light field image reconstruction: a survey
title_fullStr Deep learning methods for high-resolution microscale light field image reconstruction: a survey
title_full_unstemmed Deep learning methods for high-resolution microscale light field image reconstruction: a survey
title_short Deep learning methods for high-resolution microscale light field image reconstruction: a survey
title_sort deep learning methods for high resolution microscale light field image reconstruction a survey
topic deep learning
light field microscopy
light field imaging
high resolution
volumetric reconstruction
url https://www.frontiersin.org/articles/10.3389/fbioe.2024.1500270/full
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AT zhijingzhu deeplearningmethodsforhighresolutionmicroscalelightfieldimagereconstructionasurvey
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