Environment is associated with chytrid infection and skin microbiome richness on an amphibian rich island (Taiwan)

Abstract Growing evidence suggests that the origins of the panzootic amphibian pathogens Batrachochytrium dendrobatidis (Bd) and Batrachochytrium salamandrivorans (Bsal) are in Asia. In Taiwan, an island hotspot of high amphibian diversity, no amphibian mass mortality events linked to Bd or Bsal hav...

詳細記述

書誌詳細
出版年:Scientific Reports
主要な著者: Dirk S. Schmeller, Tina Cheng, Jennifer Shelton, Chun-Fu Lin, Alan Chan-Alvarado, Adriana Bernardo-Cravo, Luca Zoccarato, Tzung-Su Ding, Yu-Pin Lin, Andrea Swei, Matthew C. Fisher, Vance T. Vredenburg, Adeline Loyau
フォーマット: 論文
言語:英語
出版事項: Nature Portfolio 2022-09-01
オンライン・アクセス:https://doi.org/10.1038/s41598-022-20547-3
_version_ 1852681808667213824
author Dirk S. Schmeller
Tina Cheng
Jennifer Shelton
Chun-Fu Lin
Alan Chan-Alvarado
Adriana Bernardo-Cravo
Luca Zoccarato
Tzung-Su Ding
Yu-Pin Lin
Andrea Swei
Matthew C. Fisher
Vance T. Vredenburg
Adeline Loyau
author_facet Dirk S. Schmeller
Tina Cheng
Jennifer Shelton
Chun-Fu Lin
Alan Chan-Alvarado
Adriana Bernardo-Cravo
Luca Zoccarato
Tzung-Su Ding
Yu-Pin Lin
Andrea Swei
Matthew C. Fisher
Vance T. Vredenburg
Adeline Loyau
author_sort Dirk S. Schmeller
collection DOAJ
container_title Scientific Reports
description Abstract Growing evidence suggests that the origins of the panzootic amphibian pathogens Batrachochytrium dendrobatidis (Bd) and Batrachochytrium salamandrivorans (Bsal) are in Asia. In Taiwan, an island hotspot of high amphibian diversity, no amphibian mass mortality events linked to Bd or Bsal have been reported. We conducted a multi-year study across this subtropical island, sampling 2517 individuals from 30 species at 34 field sites, between 2010 and 2017, and including 171 museum samples collected between 1981 and 2009. We analyzed the skin microbiome of 153 samples (6 species) from 2017 in order to assess any association between the amphibian skin microbiome and the probability of infection amongst different host species. We did not detect Bsal in our samples, but found widespread infection by Bd across central and northern Taiwan, both taxonomically and spatially. Museum samples show that Bd has been present in Taiwan since at least 1990. Host species, geography (elevation), climatic conditions and microbial richness were all associated with the prevalence of infection. Host life-history traits, skin microbiome composition and phylogeny were associated with lower prevalence of infection for high altitude species. Overall, we observed low prevalence and burden of infection in host populations, suggesting that Bd is enzootic in Taiwan where it causes subclinical infections. While amphibian species in Taiwan are currently threatened by habitat loss, our study indicates that Bd is in an endemic equilibrium with the populations and species we investigated. However, ongoing surveillance of the infection is warranted, as changing environmental conditions may disturb the currently stable equilibrium.
format Article
id doaj-art-652dfd98c7fc4e429e42de1cb7bc06d2
institution Directory of Open Access Journals
issn 2045-2322
language English
publishDate 2022-09-01
publisher Nature Portfolio
record_format Article
spelling doaj-art-652dfd98c7fc4e429e42de1cb7bc06d22025-08-19T21:28:16ZengNature PortfolioScientific Reports2045-23222022-09-0112111310.1038/s41598-022-20547-3Environment is associated with chytrid infection and skin microbiome richness on an amphibian rich island (Taiwan)Dirk S. Schmeller0Tina Cheng1Jennifer Shelton2Chun-Fu Lin3Alan Chan-Alvarado4Adriana Bernardo-Cravo5Luca Zoccarato6Tzung-Su Ding7Yu-Pin Lin8Andrea Swei9Matthew C. Fisher10Vance T. Vredenburg11Adeline Loyau12Laboratoire Ecologie Fonctionnelle et Environnement, Université de Toulouse, INPT, UPSDepartment of Biology, San Francisco State UniversityDepartment of Infectious Disease Epidemiology, Imperial College LondonZoology Division, Endemic Species Research InstituteDepartment of Biology, San Francisco State UniversityLaboratoire Ecologie Fonctionnelle et Environnement, Université de Toulouse, INPT, UPSDepartment of Experimental Limnology, Leibniz-Institute of Freshwater Ecology and Inland Fisheries (IGB)School of Forestry and Resource Conservation, National Taiwan UniversityDepartment of Bioenvironmental Systems Engineering, National Taiwan UniversityDepartment of Biology, San Francisco State UniversityDepartment of Infectious Disease Epidemiology, Imperial College LondonDepartment of Biology, San Francisco State UniversityLaboratoire Ecologie Fonctionnelle et Environnement, Université de Toulouse, INPT, UPSAbstract Growing evidence suggests that the origins of the panzootic amphibian pathogens Batrachochytrium dendrobatidis (Bd) and Batrachochytrium salamandrivorans (Bsal) are in Asia. In Taiwan, an island hotspot of high amphibian diversity, no amphibian mass mortality events linked to Bd or Bsal have been reported. We conducted a multi-year study across this subtropical island, sampling 2517 individuals from 30 species at 34 field sites, between 2010 and 2017, and including 171 museum samples collected between 1981 and 2009. We analyzed the skin microbiome of 153 samples (6 species) from 2017 in order to assess any association between the amphibian skin microbiome and the probability of infection amongst different host species. We did not detect Bsal in our samples, but found widespread infection by Bd across central and northern Taiwan, both taxonomically and spatially. Museum samples show that Bd has been present in Taiwan since at least 1990. Host species, geography (elevation), climatic conditions and microbial richness were all associated with the prevalence of infection. Host life-history traits, skin microbiome composition and phylogeny were associated with lower prevalence of infection for high altitude species. Overall, we observed low prevalence and burden of infection in host populations, suggesting that Bd is enzootic in Taiwan where it causes subclinical infections. While amphibian species in Taiwan are currently threatened by habitat loss, our study indicates that Bd is in an endemic equilibrium with the populations and species we investigated. However, ongoing surveillance of the infection is warranted, as changing environmental conditions may disturb the currently stable equilibrium.https://doi.org/10.1038/s41598-022-20547-3
spellingShingle Dirk S. Schmeller
Tina Cheng
Jennifer Shelton
Chun-Fu Lin
Alan Chan-Alvarado
Adriana Bernardo-Cravo
Luca Zoccarato
Tzung-Su Ding
Yu-Pin Lin
Andrea Swei
Matthew C. Fisher
Vance T. Vredenburg
Adeline Loyau
Environment is associated with chytrid infection and skin microbiome richness on an amphibian rich island (Taiwan)
title Environment is associated with chytrid infection and skin microbiome richness on an amphibian rich island (Taiwan)
title_full Environment is associated with chytrid infection and skin microbiome richness on an amphibian rich island (Taiwan)
title_fullStr Environment is associated with chytrid infection and skin microbiome richness on an amphibian rich island (Taiwan)
title_full_unstemmed Environment is associated with chytrid infection and skin microbiome richness on an amphibian rich island (Taiwan)
title_short Environment is associated with chytrid infection and skin microbiome richness on an amphibian rich island (Taiwan)
title_sort environment is associated with chytrid infection and skin microbiome richness on an amphibian rich island taiwan
url https://doi.org/10.1038/s41598-022-20547-3
work_keys_str_mv AT dirksschmeller environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT tinacheng environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT jennifershelton environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT chunfulin environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT alanchanalvarado environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT adrianabernardocravo environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT lucazoccarato environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT tzungsuding environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT yupinlin environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT andreaswei environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT matthewcfisher environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT vancetvredenburg environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan
AT adelineloyau environmentisassociatedwithchytridinfectionandskinmicrobiomerichnessonanamphibianrichislandtaiwan