Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus

Abstract Grass pea (Lathyrus sativus L.) is a rich source of protein cultivated as an insurance crop in Ethiopia, Eritrea, India, Bangladesh, and Nepal. Its resilience to both drought and flooding makes it a promising crop for ensuring food security in a changing climate. The lack of genetic resourc...

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發表在:Nature Communications
Main Authors: Anne Edwards, Isaac Njaci, Abhimanyu Sarkar, Zhouqian Jiang, Gemy George Kaithakottil, Christopher Moore, Jitender Cheema, Clare E. M. Stevenson, Martin Rejzek, Petr Novák, Marielle Vigouroux, Martin Vickers, Roland H. M. Wouters, Pirita Paajanen, Burkhard Steuernagel, Jonathan D. Moore, Janet Higgins, David Swarbreck, Stefan Martens, Colin Y. Kim, Jing-Ke Weng, Sagadevan Mundree, Benjamin Kilian, Shiv Kumar, Matt Loose, Levi Yant, Jiří Macas, Trevor L. Wang, Cathie Martin, Peter M. F. Emmrich
格式: Article
語言:英语
出版: Nature Portfolio 2023-02-01
在線閱讀:https://doi.org/10.1038/s41467-023-36503-2
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author Anne Edwards
Isaac Njaci
Abhimanyu Sarkar
Zhouqian Jiang
Gemy George Kaithakottil
Christopher Moore
Jitender Cheema
Clare E. M. Stevenson
Martin Rejzek
Petr Novák
Marielle Vigouroux
Martin Vickers
Roland H. M. Wouters
Pirita Paajanen
Burkhard Steuernagel
Jonathan D. Moore
Janet Higgins
David Swarbreck
Stefan Martens
Colin Y. Kim
Jing-Ke Weng
Sagadevan Mundree
Benjamin Kilian
Shiv Kumar
Matt Loose
Levi Yant
Jiří Macas
Trevor L. Wang
Cathie Martin
Peter M. F. Emmrich
author_facet Anne Edwards
Isaac Njaci
Abhimanyu Sarkar
Zhouqian Jiang
Gemy George Kaithakottil
Christopher Moore
Jitender Cheema
Clare E. M. Stevenson
Martin Rejzek
Petr Novák
Marielle Vigouroux
Martin Vickers
Roland H. M. Wouters
Pirita Paajanen
Burkhard Steuernagel
Jonathan D. Moore
Janet Higgins
David Swarbreck
Stefan Martens
Colin Y. Kim
Jing-Ke Weng
Sagadevan Mundree
Benjamin Kilian
Shiv Kumar
Matt Loose
Levi Yant
Jiří Macas
Trevor L. Wang
Cathie Martin
Peter M. F. Emmrich
author_sort Anne Edwards
collection DOAJ
container_title Nature Communications
description Abstract Grass pea (Lathyrus sativus L.) is a rich source of protein cultivated as an insurance crop in Ethiopia, Eritrea, India, Bangladesh, and Nepal. Its resilience to both drought and flooding makes it a promising crop for ensuring food security in a changing climate. The lack of genetic resources and the crop’s association with the disease neurolathyrism have limited the cultivation of grass pea. Here, we present an annotated, long read-based assembly of the 6.5 Gbp L. sativus genome. Using this genome sequence, we have elucidated the biosynthetic pathway leading to the formation of the neurotoxin, β-L-oxalyl-2,3-diaminopropionic acid (β-L-ODAP). The final reaction of the pathway depends on an interaction between L. sativus acyl-activating enzyme 3 (LsAAE3) and a BAHD-acyltransferase (LsBOS) that form a metabolon activated by CoA to produce β-L-ODAP. This provides valuable insight into the best approaches for developing varieties which produce substantially less toxin.
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spelling doaj-art-66071d22de3b49e497d4e23d84d5e4d02025-08-19T23:18:57ZengNature PortfolioNature Communications2041-17232023-02-0114111610.1038/s41467-023-36503-2Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativusAnne Edwards0Isaac Njaci1Abhimanyu Sarkar2Zhouqian Jiang3Gemy George Kaithakottil4Christopher Moore5Jitender Cheema6Clare E. M. Stevenson7Martin Rejzek8Petr Novák9Marielle Vigouroux10Martin Vickers11Roland H. M. Wouters12Pirita Paajanen13Burkhard Steuernagel14Jonathan D. Moore15Janet Higgins16David Swarbreck17Stefan Martens18Colin Y. Kim19Jing-Ke Weng20Sagadevan Mundree21Benjamin Kilian22Shiv Kumar23Matt Loose24Levi Yant25Jiří Macas26Trevor L. Wang27Cathie Martin28Peter M. F. Emmrich29John Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkEarlham Institute, Norwich Research Park, Colney LaneSchool of Life Sciences, University of Nottingham, University ParkJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkInstitute of Plant Molecular Biology, Biology Centre CASJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkEarlham Institute, Norwich Research Park, Colney LaneEarlham Institute, Norwich Research Park, Colney LaneResearch and Innovation Centre, Fondazione Edmund MachWhitehead Institute for Biomedical ResearchWhitehead Institute for Biomedical ResearchQueensland University of TechnologyGlobal Crop Diversity TrustInternational Center for Agricultural Research in the Dry Areas, Avenue Hafiane CherkaouiSchool of Life Sciences, University of Nottingham, University ParkSchool of Life Sciences, University of Nottingham, University ParkInstitute of Plant Molecular Biology, Biology Centre CASJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkJohn Innes Centre, Norwich Research ParkAbstract Grass pea (Lathyrus sativus L.) is a rich source of protein cultivated as an insurance crop in Ethiopia, Eritrea, India, Bangladesh, and Nepal. Its resilience to both drought and flooding makes it a promising crop for ensuring food security in a changing climate. The lack of genetic resources and the crop’s association with the disease neurolathyrism have limited the cultivation of grass pea. Here, we present an annotated, long read-based assembly of the 6.5 Gbp L. sativus genome. Using this genome sequence, we have elucidated the biosynthetic pathway leading to the formation of the neurotoxin, β-L-oxalyl-2,3-diaminopropionic acid (β-L-ODAP). The final reaction of the pathway depends on an interaction between L. sativus acyl-activating enzyme 3 (LsAAE3) and a BAHD-acyltransferase (LsBOS) that form a metabolon activated by CoA to produce β-L-ODAP. This provides valuable insight into the best approaches for developing varieties which produce substantially less toxin.https://doi.org/10.1038/s41467-023-36503-2
spellingShingle Anne Edwards
Isaac Njaci
Abhimanyu Sarkar
Zhouqian Jiang
Gemy George Kaithakottil
Christopher Moore
Jitender Cheema
Clare E. M. Stevenson
Martin Rejzek
Petr Novák
Marielle Vigouroux
Martin Vickers
Roland H. M. Wouters
Pirita Paajanen
Burkhard Steuernagel
Jonathan D. Moore
Janet Higgins
David Swarbreck
Stefan Martens
Colin Y. Kim
Jing-Ke Weng
Sagadevan Mundree
Benjamin Kilian
Shiv Kumar
Matt Loose
Levi Yant
Jiří Macas
Trevor L. Wang
Cathie Martin
Peter M. F. Emmrich
Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus
title Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus
title_full Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus
title_fullStr Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus
title_full_unstemmed Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus
title_short Genomics and biochemical analyses reveal a metabolon key to β-L-ODAP biosynthesis in Lathyrus sativus
title_sort genomics and biochemical analyses reveal a metabolon key to β l odap biosynthesis in lathyrus sativus
url https://doi.org/10.1038/s41467-023-36503-2
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