Brain Tumor Detection and Classification Using Fine-Tuned CNN with ResNet50 and U-Net Model: A Study on TCGA-LGG and TCIA Dataset for MRI Applications
Nowadays, brain tumors have become a leading cause of mortality worldwide. The brain cells in the tumor grow abnormally and badly affect the surrounding brain cells. These cells could be either cancerous or non-cancerous types, and their symptoms can vary depending on their location, size, and type....
| Published in: | Life |
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| Main Authors: | , , , , , , , , , , |
| Format: | Article |
| Language: | English |
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MDPI AG
2023-06-01
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| Online Access: | https://www.mdpi.com/2075-1729/13/7/1449 |
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| author | Abdullah A. Asiri Ahmad Shaf Tariq Ali Muhammad Aamir Muhammad Irfan Saeed Alqahtani Khlood M. Mehdar Hanan Talal Halawani Ali H. Alghamdi Abdullah Fahad A. Alshamrani Samar M. Alqhtani |
| author_facet | Abdullah A. Asiri Ahmad Shaf Tariq Ali Muhammad Aamir Muhammad Irfan Saeed Alqahtani Khlood M. Mehdar Hanan Talal Halawani Ali H. Alghamdi Abdullah Fahad A. Alshamrani Samar M. Alqhtani |
| author_sort | Abdullah A. Asiri |
| collection | DOAJ |
| container_title | Life |
| description | Nowadays, brain tumors have become a leading cause of mortality worldwide. The brain cells in the tumor grow abnormally and badly affect the surrounding brain cells. These cells could be either cancerous or non-cancerous types, and their symptoms can vary depending on their location, size, and type. Due to its complex and varying structure, detecting and classifying the brain tumor accurately at the initial stages to avoid maximum death loss is challenging. This research proposes an improved fine-tuned model based on CNN with ResNet50 and U-Net to solve this problem. This model works on the publicly available dataset known as TCGA-LGG and TCIA. The dataset consists of 120 patients. The proposed CNN and fine-tuned ResNet50 model are used to detect and classify the tumor or no-tumor images. Furthermore, the U-Net model is integrated for the segmentation of the tumor regions correctly. The model performance evaluation metrics are accuracy, intersection over union, dice similarity coefficient, and similarity index. The results from fine-tuned ResNet50 model are IoU: 0.91, DSC: 0.95, SI: 0.95. In contrast, U-Net with ResNet50 outperforms all other models and correctly classified and segmented the tumor region. |
| format | Article |
| id | doaj-art-7db5ec79b32847dc8d4fcbb7f917a413 |
| institution | Directory of Open Access Journals |
| issn | 2075-1729 |
| language | English |
| publishDate | 2023-06-01 |
| publisher | MDPI AG |
| record_format | Article |
| spelling | doaj-art-7db5ec79b32847dc8d4fcbb7f917a4132025-08-20T01:01:14ZengMDPI AGLife2075-17292023-06-01137144910.3390/life13071449Brain Tumor Detection and Classification Using Fine-Tuned CNN with ResNet50 and U-Net Model: A Study on TCGA-LGG and TCIA Dataset for MRI ApplicationsAbdullah A. Asiri0Ahmad Shaf1Tariq Ali2Muhammad Aamir3Muhammad Irfan4Saeed Alqahtani5Khlood M. Mehdar6Hanan Talal Halawani7Ali H. Alghamdi8Abdullah Fahad A. Alshamrani9Samar M. Alqhtani10Radiological Sciences Department, College of Applied Medical Sciences, Najran University, Najran 61441, Saudi ArabiaDepartment of Computer Science, Sahiwal Campus, COMSATS University Islamabad, Sahiwal 57000, PakistanDepartment of Computer Science, Sahiwal Campus, COMSATS University Islamabad, Sahiwal 57000, PakistanDepartment of Computer Science, Sahiwal Campus, COMSATS University Islamabad, Sahiwal 57000, PakistanElectrical Engineering Department, College of Engineering, Najran University, Najran 61441, Saudi ArabiaRadiological Sciences Department, College of Applied Medical Sciences, Najran University, Najran 61441, Saudi ArabiaAnatomy Department, Medicine College, Najran University, Najran 61441, Saudi ArabiaComputer Science Department, College of Computer Science and Information Systems, Najran University, Najran 61441, Saudi ArabiaDepartment of Radiological Sciences, Faculty of Applied Medical Sciences, The University of Tabuk, Tabuk 47512, Saudi ArabiaDepartment of Diagnostic Radiology Technology, College of Applied Medical Sciences, Taibah University, Madinah 42353, Saudi ArabiaDepartment of Information Systems, College of Computer Science and Information Systems, Najran University, Najran 61441, Saudi ArabiaNowadays, brain tumors have become a leading cause of mortality worldwide. The brain cells in the tumor grow abnormally and badly affect the surrounding brain cells. These cells could be either cancerous or non-cancerous types, and their symptoms can vary depending on their location, size, and type. Due to its complex and varying structure, detecting and classifying the brain tumor accurately at the initial stages to avoid maximum death loss is challenging. This research proposes an improved fine-tuned model based on CNN with ResNet50 and U-Net to solve this problem. This model works on the publicly available dataset known as TCGA-LGG and TCIA. The dataset consists of 120 patients. The proposed CNN and fine-tuned ResNet50 model are used to detect and classify the tumor or no-tumor images. Furthermore, the U-Net model is integrated for the segmentation of the tumor regions correctly. The model performance evaluation metrics are accuracy, intersection over union, dice similarity coefficient, and similarity index. The results from fine-tuned ResNet50 model are IoU: 0.91, DSC: 0.95, SI: 0.95. In contrast, U-Net with ResNet50 outperforms all other models and correctly classified and segmented the tumor region.https://www.mdpi.com/2075-1729/13/7/1449brain tumorU-NetResNet50CNNsegmentation |
| spellingShingle | Abdullah A. Asiri Ahmad Shaf Tariq Ali Muhammad Aamir Muhammad Irfan Saeed Alqahtani Khlood M. Mehdar Hanan Talal Halawani Ali H. Alghamdi Abdullah Fahad A. Alshamrani Samar M. Alqhtani Brain Tumor Detection and Classification Using Fine-Tuned CNN with ResNet50 and U-Net Model: A Study on TCGA-LGG and TCIA Dataset for MRI Applications brain tumor U-Net ResNet50 CNN segmentation |
| title | Brain Tumor Detection and Classification Using Fine-Tuned CNN with ResNet50 and U-Net Model: A Study on TCGA-LGG and TCIA Dataset for MRI Applications |
| title_full | Brain Tumor Detection and Classification Using Fine-Tuned CNN with ResNet50 and U-Net Model: A Study on TCGA-LGG and TCIA Dataset for MRI Applications |
| title_fullStr | Brain Tumor Detection and Classification Using Fine-Tuned CNN with ResNet50 and U-Net Model: A Study on TCGA-LGG and TCIA Dataset for MRI Applications |
| title_full_unstemmed | Brain Tumor Detection and Classification Using Fine-Tuned CNN with ResNet50 and U-Net Model: A Study on TCGA-LGG and TCIA Dataset for MRI Applications |
| title_short | Brain Tumor Detection and Classification Using Fine-Tuned CNN with ResNet50 and U-Net Model: A Study on TCGA-LGG and TCIA Dataset for MRI Applications |
| title_sort | brain tumor detection and classification using fine tuned cnn with resnet50 and u net model a study on tcga lgg and tcia dataset for mri applications |
| topic | brain tumor U-Net ResNet50 CNN segmentation |
| url | https://www.mdpi.com/2075-1729/13/7/1449 |
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