Immune-Related LncRNAs to Construct a Prognosis Risk-Assessment Model for Gastric Cancer

Background: Gastric cancer is a prevalent cause of tumor death. Tumor immunotherapy aims to reshape the specific immunity to tumors in order to kill the tumor. LncRNAs play a pivotal role in regulating the tumor immune microenvironment. Herein, immune-related lncRNAs were used to establish a prognos...

全面介紹

書目詳細資料
發表在:Current Oncology
Main Authors: Shilin Zhi, Bin Yang, Shengning Zhou, Jianan Tan, Guangyu Zhong, Fanghai Han
格式: Article
語言:英语
出版: MDPI AG 2022-07-01
主題:
在線閱讀:https://www.mdpi.com/1718-7729/29/7/391
_version_ 1850133945864159232
author Shilin Zhi
Bin Yang
Shengning Zhou
Jianan Tan
Guangyu Zhong
Fanghai Han
author_facet Shilin Zhi
Bin Yang
Shengning Zhou
Jianan Tan
Guangyu Zhong
Fanghai Han
author_sort Shilin Zhi
collection DOAJ
container_title Current Oncology
description Background: Gastric cancer is a prevalent cause of tumor death. Tumor immunotherapy aims to reshape the specific immunity to tumors in order to kill the tumor. LncRNAs play a pivotal role in regulating the tumor immune microenvironment. Herein, immune-related lncRNAs were used to establish a prognosis risk-assessment model for gastric cancer and provide personalized predictions while providing insights and targets for gastric cancer treatment to enhance patient prognosis. Methods: Gastric adenocarcinoma transcriptome and clinical data were acquired from the The Cancer Genome Atlas (TCGA) database to screen the immune-related lncRNAs. Then, LASSO COX regression was utilized to construct the prognosis risk-assessment model. Afterward, the reliability of the model was evaluated the relationship between immune infiltration, clinical characteristics, and the model was analyzed. Results: We identified 13 lncRNAs and constructed the prognosis assessment model. According to the median risk score of the training set, the patients were assigned to different risk groups. Overall survival time was shorter in the high-risk group. In the high-risk group, higher infiltration of mono-macrophages, dendritic cells, CD4+ T cells, and CD8+ T cells was observed. Moreover, the model was positively related to tumor metastasis. Conclusion: The prognosis risk-assessment model developed in this research can effectively predict the prognosis of gastric cancer patients. This tool is expected to be further applied to clinics in the future, thus providing a novel target for immunotherapy in gastric cancer patients.
format Article
id doaj-art-8ba80b8b514b42aeb90f3ab0c8bcd7aa
institution Directory of Open Access Journals
issn 1198-0052
1718-7729
language English
publishDate 2022-07-01
publisher MDPI AG
record_format Article
spelling doaj-art-8ba80b8b514b42aeb90f3ab0c8bcd7aa2025-08-19T23:51:47ZengMDPI AGCurrent Oncology1198-00521718-77292022-07-012974923493510.3390/curroncol29070391Immune-Related LncRNAs to Construct a Prognosis Risk-Assessment Model for Gastric CancerShilin Zhi0Bin Yang1Shengning Zhou2Jianan Tan3Guangyu Zhong4Fanghai Han5Department of Gastrointestinal Surgery, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou 510120, ChinaDepartment of Gastrointestinal Surgery, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou 510120, ChinaDepartment of Gastrointestinal Surgery, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou 510120, ChinaDepartment of Gastrointestinal Surgery, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou 510120, ChinaDepartment of Gastrointestinal Surgery, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou 510120, ChinaDepartment of Gastrointestinal Surgery, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, Guangzhou 510120, ChinaBackground: Gastric cancer is a prevalent cause of tumor death. Tumor immunotherapy aims to reshape the specific immunity to tumors in order to kill the tumor. LncRNAs play a pivotal role in regulating the tumor immune microenvironment. Herein, immune-related lncRNAs were used to establish a prognosis risk-assessment model for gastric cancer and provide personalized predictions while providing insights and targets for gastric cancer treatment to enhance patient prognosis. Methods: Gastric adenocarcinoma transcriptome and clinical data were acquired from the The Cancer Genome Atlas (TCGA) database to screen the immune-related lncRNAs. Then, LASSO COX regression was utilized to construct the prognosis risk-assessment model. Afterward, the reliability of the model was evaluated the relationship between immune infiltration, clinical characteristics, and the model was analyzed. Results: We identified 13 lncRNAs and constructed the prognosis assessment model. According to the median risk score of the training set, the patients were assigned to different risk groups. Overall survival time was shorter in the high-risk group. In the high-risk group, higher infiltration of mono-macrophages, dendritic cells, CD4+ T cells, and CD8+ T cells was observed. Moreover, the model was positively related to tumor metastasis. Conclusion: The prognosis risk-assessment model developed in this research can effectively predict the prognosis of gastric cancer patients. This tool is expected to be further applied to clinics in the future, thus providing a novel target for immunotherapy in gastric cancer patients.https://www.mdpi.com/1718-7729/29/7/391gastric cancerimmune infiltrationlncRNA
spellingShingle Shilin Zhi
Bin Yang
Shengning Zhou
Jianan Tan
Guangyu Zhong
Fanghai Han
Immune-Related LncRNAs to Construct a Prognosis Risk-Assessment Model for Gastric Cancer
gastric cancer
immune infiltration
lncRNA
title Immune-Related LncRNAs to Construct a Prognosis Risk-Assessment Model for Gastric Cancer
title_full Immune-Related LncRNAs to Construct a Prognosis Risk-Assessment Model for Gastric Cancer
title_fullStr Immune-Related LncRNAs to Construct a Prognosis Risk-Assessment Model for Gastric Cancer
title_full_unstemmed Immune-Related LncRNAs to Construct a Prognosis Risk-Assessment Model for Gastric Cancer
title_short Immune-Related LncRNAs to Construct a Prognosis Risk-Assessment Model for Gastric Cancer
title_sort immune related lncrnas to construct a prognosis risk assessment model for gastric cancer
topic gastric cancer
immune infiltration
lncRNA
url https://www.mdpi.com/1718-7729/29/7/391
work_keys_str_mv AT shilinzhi immunerelatedlncrnastoconstructaprognosisriskassessmentmodelforgastriccancer
AT binyang immunerelatedlncrnastoconstructaprognosisriskassessmentmodelforgastriccancer
AT shengningzhou immunerelatedlncrnastoconstructaprognosisriskassessmentmodelforgastriccancer
AT jianantan immunerelatedlncrnastoconstructaprognosisriskassessmentmodelforgastriccancer
AT guangyuzhong immunerelatedlncrnastoconstructaprognosisriskassessmentmodelforgastriccancer
AT fanghaihan immunerelatedlncrnastoconstructaprognosisriskassessmentmodelforgastriccancer