Segmentation of Sandplain Lupin Weeds from Morphologically Similar Narrow-Leafed Lupins in the Field

Narrow-leafed lupin (<i>Lupinus angustifolius</i>) is an important dryland crop, providing a protein source in global grain markets. While agronomic practices have successfully controlled many dicot weeds among narrow-leafed lupins, the closely related sandplain lupin (<i>Lupinus c...

وصف كامل

التفاصيل البيبلوغرافية
الحاوية / القاعدة:Remote Sensing
المؤلفون الرئيسيون: Monica F. Danilevicz, Roberto Lujan Rocha, Jacqueline Batley, Philipp E. Bayer, Mohammed Bennamoun, David Edwards, Michael B. Ashworth
التنسيق: مقال
اللغة:الإنجليزية
منشور في: MDPI AG 2023-03-01
الموضوعات:
الوصول للمادة أونلاين:https://www.mdpi.com/2072-4292/15/7/1817
_version_ 1850406741129297920
author Monica F. Danilevicz
Roberto Lujan Rocha
Jacqueline Batley
Philipp E. Bayer
Mohammed Bennamoun
David Edwards
Michael B. Ashworth
author_facet Monica F. Danilevicz
Roberto Lujan Rocha
Jacqueline Batley
Philipp E. Bayer
Mohammed Bennamoun
David Edwards
Michael B. Ashworth
author_sort Monica F. Danilevicz
collection DOAJ
container_title Remote Sensing
description Narrow-leafed lupin (<i>Lupinus angustifolius</i>) is an important dryland crop, providing a protein source in global grain markets. While agronomic practices have successfully controlled many dicot weeds among narrow-leafed lupins, the closely related sandplain lupin (<i>Lupinus cosentinii</i>) has proven difficult to control, reducing yield and harvest quality. Here, we successfully trained a segmentation model to detect sandplain lupins and differentiate them from narrow-leafed lupins under field conditions. The deep learning model was trained using 9171 images collected from a field site in the Western Australian grain belt. Images were collected using an unoccupied aerial vehicle at heights of 4, 10, and 20 m. The dataset was supplemented with images sourced from the WeedAI database, which were collected at 1.5 m. The resultant model had an average precision of 0.86, intersection over union of 0.60, and F1 score of 0.70 for segmenting the narrow-leafed and sandplain lupins across the multiple datasets. Images collected at a closer range and showing plants at an early developmental stage had significantly higher precision and recall scores (<i>p</i>-value < 0.05), indicating image collection methods and plant developmental stages play a substantial role in the model performance. Nonetheless, the model identified 80.3% of the sandplain lupins on average, with a low variation (±6.13%) in performance across the 5 datasets. The results presented in this study contribute to the development of precision weed management systems within morphologically similar crops, particularly for sandplain lupin detection, supporting future narrow-leafed lupin grain yield and quality.
format Article
id doaj-art-8ed7bfb59ece4eb082c76a498dbff4d2
institution Directory of Open Access Journals
issn 2072-4292
language English
publishDate 2023-03-01
publisher MDPI AG
record_format Article
spelling doaj-art-8ed7bfb59ece4eb082c76a498dbff4d22025-08-19T22:48:09ZengMDPI AGRemote Sensing2072-42922023-03-01157181710.3390/rs15071817Segmentation of Sandplain Lupin Weeds from Morphologically Similar Narrow-Leafed Lupins in the FieldMonica F. Danilevicz0Roberto Lujan Rocha1Jacqueline Batley2Philipp E. Bayer3Mohammed Bennamoun4David Edwards5Michael B. Ashworth6Centre for Applied Bioinformatics, School of Biological Sciences, University of Western Australia, Perth, WA 6009, AustraliaAustralian Herbicide Resistance Initiative, School of Agriculture and Environment, The University of Western Australia, Perth, WA 6009, AustraliaCentre for Applied Bioinformatics, School of Biological Sciences, University of Western Australia, Perth, WA 6009, AustraliaMinderoo Foundation, Perth, WA 6009, AustraliaDepartment of Computer Science and Software Engineering, University of Western Australia, Perth, WA 6009, AustraliaCentre for Applied Bioinformatics, School of Biological Sciences, University of Western Australia, Perth, WA 6009, AustraliaAustralian Herbicide Resistance Initiative, School of Agriculture and Environment, The University of Western Australia, Perth, WA 6009, AustraliaNarrow-leafed lupin (<i>Lupinus angustifolius</i>) is an important dryland crop, providing a protein source in global grain markets. While agronomic practices have successfully controlled many dicot weeds among narrow-leafed lupins, the closely related sandplain lupin (<i>Lupinus cosentinii</i>) has proven difficult to control, reducing yield and harvest quality. Here, we successfully trained a segmentation model to detect sandplain lupins and differentiate them from narrow-leafed lupins under field conditions. The deep learning model was trained using 9171 images collected from a field site in the Western Australian grain belt. Images were collected using an unoccupied aerial vehicle at heights of 4, 10, and 20 m. The dataset was supplemented with images sourced from the WeedAI database, which were collected at 1.5 m. The resultant model had an average precision of 0.86, intersection over union of 0.60, and F1 score of 0.70 for segmenting the narrow-leafed and sandplain lupins across the multiple datasets. Images collected at a closer range and showing plants at an early developmental stage had significantly higher precision and recall scores (<i>p</i>-value < 0.05), indicating image collection methods and plant developmental stages play a substantial role in the model performance. Nonetheless, the model identified 80.3% of the sandplain lupins on average, with a low variation (±6.13%) in performance across the 5 datasets. The results presented in this study contribute to the development of precision weed management systems within morphologically similar crops, particularly for sandplain lupin detection, supporting future narrow-leafed lupin grain yield and quality.https://www.mdpi.com/2072-4292/15/7/1817narrow-leafed lupinsandplain lupin<i>Lupinus angustifolius</i><i>Lupinus cosentinii</i>image segmentationdeep learning
spellingShingle Monica F. Danilevicz
Roberto Lujan Rocha
Jacqueline Batley
Philipp E. Bayer
Mohammed Bennamoun
David Edwards
Michael B. Ashworth
Segmentation of Sandplain Lupin Weeds from Morphologically Similar Narrow-Leafed Lupins in the Field
narrow-leafed lupin
sandplain lupin
<i>Lupinus angustifolius</i>
<i>Lupinus cosentinii</i>
image segmentation
deep learning
title Segmentation of Sandplain Lupin Weeds from Morphologically Similar Narrow-Leafed Lupins in the Field
title_full Segmentation of Sandplain Lupin Weeds from Morphologically Similar Narrow-Leafed Lupins in the Field
title_fullStr Segmentation of Sandplain Lupin Weeds from Morphologically Similar Narrow-Leafed Lupins in the Field
title_full_unstemmed Segmentation of Sandplain Lupin Weeds from Morphologically Similar Narrow-Leafed Lupins in the Field
title_short Segmentation of Sandplain Lupin Weeds from Morphologically Similar Narrow-Leafed Lupins in the Field
title_sort segmentation of sandplain lupin weeds from morphologically similar narrow leafed lupins in the field
topic narrow-leafed lupin
sandplain lupin
<i>Lupinus angustifolius</i>
<i>Lupinus cosentinii</i>
image segmentation
deep learning
url https://www.mdpi.com/2072-4292/15/7/1817
work_keys_str_mv AT monicafdanilevicz segmentationofsandplainlupinweedsfrommorphologicallysimilarnarrowleafedlupinsinthefield
AT robertolujanrocha segmentationofsandplainlupinweedsfrommorphologicallysimilarnarrowleafedlupinsinthefield
AT jacquelinebatley segmentationofsandplainlupinweedsfrommorphologicallysimilarnarrowleafedlupinsinthefield
AT philippebayer segmentationofsandplainlupinweedsfrommorphologicallysimilarnarrowleafedlupinsinthefield
AT mohammedbennamoun segmentationofsandplainlupinweedsfrommorphologicallysimilarnarrowleafedlupinsinthefield
AT davidedwards segmentationofsandplainlupinweedsfrommorphologicallysimilarnarrowleafedlupinsinthefield
AT michaelbashworth segmentationofsandplainlupinweedsfrommorphologicallysimilarnarrowleafedlupinsinthefield