Histone H3 serine-57 is a CHK1 substrate whose phosphorylation affects DNA repair

Abstract Histone post-translational modifications promote a chromatin environment that controls transcription, DNA replication and repair, but surprisingly few phosphorylations have been documented. We report the discovery of histone H3 serine-57 phosphorylation (H3S57ph) and show that it is implica...

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Published in:Nature Communications
Main Authors: Nikolaos Parisis, Pablo D. Dans, Muhammad Jbara, Balveer Singh, Diane Schausi-Tiffoche, Diego Molina-Serrano, Isabelle Brun-Heath, Denisa Hendrychová, Suman Kumar Maity, Diana Buitrago, Rafael Lema, Thiziri Nait Achour, Simona Giunta, Michael Girardot, Nicolas Talarek, Valérie Rofidal, Katerina Danezi, Damien Coudreuse, Marie-Noëlle Prioleau, Robert Feil, Modesto Orozco, Ashraf Brik, Pei-Yun Jenny Wu, Liliana Krasinska, Daniel Fisher
Format: Article
Language:English
Published: Nature Portfolio 2023-08-01
Online Access:https://doi.org/10.1038/s41467-023-40843-4
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author Nikolaos Parisis
Pablo D. Dans
Muhammad Jbara
Balveer Singh
Diane Schausi-Tiffoche
Diego Molina-Serrano
Isabelle Brun-Heath
Denisa Hendrychová
Suman Kumar Maity
Diana Buitrago
Rafael Lema
Thiziri Nait Achour
Simona Giunta
Michael Girardot
Nicolas Talarek
Valérie Rofidal
Katerina Danezi
Damien Coudreuse
Marie-Noëlle Prioleau
Robert Feil
Modesto Orozco
Ashraf Brik
Pei-Yun Jenny Wu
Liliana Krasinska
Daniel Fisher
author_facet Nikolaos Parisis
Pablo D. Dans
Muhammad Jbara
Balveer Singh
Diane Schausi-Tiffoche
Diego Molina-Serrano
Isabelle Brun-Heath
Denisa Hendrychová
Suman Kumar Maity
Diana Buitrago
Rafael Lema
Thiziri Nait Achour
Simona Giunta
Michael Girardot
Nicolas Talarek
Valérie Rofidal
Katerina Danezi
Damien Coudreuse
Marie-Noëlle Prioleau
Robert Feil
Modesto Orozco
Ashraf Brik
Pei-Yun Jenny Wu
Liliana Krasinska
Daniel Fisher
author_sort Nikolaos Parisis
collection DOAJ
container_title Nature Communications
description Abstract Histone post-translational modifications promote a chromatin environment that controls transcription, DNA replication and repair, but surprisingly few phosphorylations have been documented. We report the discovery of histone H3 serine-57 phosphorylation (H3S57ph) and show that it is implicated in different DNA repair pathways from fungi to vertebrates. We identified CHK1 as a major human H3S57 kinase, and disrupting or constitutively mimicking H3S57ph had opposing effects on rate of recovery from replication stress, 53BP1 chromatin binding, and dependency on RAD52. In fission yeast, mutation of all H3 alleles to S57A abrogated DNA repair by both non-homologous end-joining and homologous recombination, while cells with phospho-mimicking S57D alleles were partly compromised for both repair pathways, presented aberrant Rad52 foci and were strongly sensitised to replication stress. Mechanistically, H3S57ph loosens DNA-histone contacts, increasing nucleosome mobility, and interacts with H3K56. Our results suggest that dynamic phosphorylation of H3S57 is required for DNA repair and recovery from replication stress, opening avenues for investigating the role of this modification in other DNA-related processes.
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spelling doaj-art-aae698efdb56403c8aba30b80d3ec1972025-08-20T01:10:51ZengNature PortfolioNature Communications2041-17232023-08-0114112010.1038/s41467-023-40843-4Histone H3 serine-57 is a CHK1 substrate whose phosphorylation affects DNA repairNikolaos Parisis0Pablo D. Dans1Muhammad Jbara2Balveer Singh3Diane Schausi-Tiffoche4Diego Molina-Serrano5Isabelle Brun-Heath6Denisa Hendrychová7Suman Kumar Maity8Diana Buitrago9Rafael Lema10Thiziri Nait Achour11Simona Giunta12Michael Girardot13Nicolas Talarek14Valérie Rofidal15Katerina Danezi16Damien Coudreuse17Marie-Noëlle Prioleau18Robert Feil19Modesto Orozco20Ashraf Brik21Pei-Yun Jenny Wu22Liliana Krasinska23Daniel Fisher24IGMM, CNRS, INSERM, University of MontpellierIRB Barcelona, BISTSchulich Faculty of Chemistry, Technion Israel Institute of TechnologyIGDR, CNRS, University of RennesIGDR, CNRS, University of RennesIGDR, CNRS, University of RennesIRB Barcelona, BISTIGMM, CNRS, INSERM, University of MontpellierSchulich Faculty of Chemistry, Technion Israel Institute of TechnologyIRB Barcelona, BISTIRB Barcelona, BISTIGMM, CNRS, INSERM, University of MontpellierThe Rockefeller UniversityIGMM, CNRS, INSERM, University of MontpellierIGMM, CNRS, INSERM, University of MontpellierBPMP, CNRS, INRA, Montpellier SupAgro, University of MontpellierIGMM, CNRS, INSERM, University of MontpellierIGDR, CNRS, University of RennesInstitut Jacques Monod, CNRS, University Paris DiderotIGMM, CNRS, INSERM, University of MontpellierIRB Barcelona, BISTSchulich Faculty of Chemistry, Technion Israel Institute of TechnologyIGDR, CNRS, University of RennesIGMM, CNRS, INSERM, University of MontpellierIGMM, CNRS, INSERM, University of MontpellierAbstract Histone post-translational modifications promote a chromatin environment that controls transcription, DNA replication and repair, but surprisingly few phosphorylations have been documented. We report the discovery of histone H3 serine-57 phosphorylation (H3S57ph) and show that it is implicated in different DNA repair pathways from fungi to vertebrates. We identified CHK1 as a major human H3S57 kinase, and disrupting or constitutively mimicking H3S57ph had opposing effects on rate of recovery from replication stress, 53BP1 chromatin binding, and dependency on RAD52. In fission yeast, mutation of all H3 alleles to S57A abrogated DNA repair by both non-homologous end-joining and homologous recombination, while cells with phospho-mimicking S57D alleles were partly compromised for both repair pathways, presented aberrant Rad52 foci and were strongly sensitised to replication stress. Mechanistically, H3S57ph loosens DNA-histone contacts, increasing nucleosome mobility, and interacts with H3K56. Our results suggest that dynamic phosphorylation of H3S57 is required for DNA repair and recovery from replication stress, opening avenues for investigating the role of this modification in other DNA-related processes.https://doi.org/10.1038/s41467-023-40843-4
spellingShingle Nikolaos Parisis
Pablo D. Dans
Muhammad Jbara
Balveer Singh
Diane Schausi-Tiffoche
Diego Molina-Serrano
Isabelle Brun-Heath
Denisa Hendrychová
Suman Kumar Maity
Diana Buitrago
Rafael Lema
Thiziri Nait Achour
Simona Giunta
Michael Girardot
Nicolas Talarek
Valérie Rofidal
Katerina Danezi
Damien Coudreuse
Marie-Noëlle Prioleau
Robert Feil
Modesto Orozco
Ashraf Brik
Pei-Yun Jenny Wu
Liliana Krasinska
Daniel Fisher
Histone H3 serine-57 is a CHK1 substrate whose phosphorylation affects DNA repair
title Histone H3 serine-57 is a CHK1 substrate whose phosphorylation affects DNA repair
title_full Histone H3 serine-57 is a CHK1 substrate whose phosphorylation affects DNA repair
title_fullStr Histone H3 serine-57 is a CHK1 substrate whose phosphorylation affects DNA repair
title_full_unstemmed Histone H3 serine-57 is a CHK1 substrate whose phosphorylation affects DNA repair
title_short Histone H3 serine-57 is a CHK1 substrate whose phosphorylation affects DNA repair
title_sort histone h3 serine 57 is a chk1 substrate whose phosphorylation affects dna repair
url https://doi.org/10.1038/s41467-023-40843-4
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