The complete chloroplast genome sequence of Vitis davidii Foex strain ‘SJTU003’

In the present study, the complete chloroplast genome of Vitis davidii Foex strain ‘SJTU003’ was assembled and subjected to phylogenetic analysis. This chloroplast genome of ‘SJTU003’ was 161,335 bp in length, including two inverted repeat regions (IRa and IRb) that were separated by a large single-...

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Bibliographic Details
Published in:Mitochondrial DNA. Part B. Resources
Main Authors: Quanyou Tian, Peining Fu, Wei Wu, Rongfang Li, Lyubka Koleva, Jiang Lu, Shiren Song
Format: Article
Language:English
Published: Taylor & Francis Group 2019-07-01
Subjects:
vitis davidii foex
illumina sequencing
chloroplast genome
phylogenetic analysis
Online Access:http://dx.doi.org/10.1080/23802359.2019.1673234
Description
Summary:In the present study, the complete chloroplast genome of Vitis davidii Foex strain ‘SJTU003’ was assembled and subjected to phylogenetic analysis. This chloroplast genome of ‘SJTU003’ was 161,335 bp in length, including two inverted repeat regions (IRa and IRb) that were separated by a large single-copy region (89,570 bp) and a small single-copy region (19,059 bp). The genome contained 133 genes, including 88 protein-coding genes, 37 tRNA genes, and 8 rRNA genes. Phylogenetic analysis indicated that V. davidii is most closely related to Vitis flexuosa and Vitis amurensis.
ISSN:2380-2359

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