The plastid genome of a large hemiepiphytic plants Ficus altissima (Moraceae)
Ficus altissima Blume is a hemiepiphytic monoecious fig species of the genus Ficus in the family Moraceae. To better determine its phylogenetic location with respect to the other Ficus species, the complete plastid genome of F. altissima was sequenced. The whole plastome is 160,251 bp in length, con...
| 出版年: | Mitochondrial DNA. Part B. Resources |
|---|---|
| 主要な著者: | , , , , |
| フォーマット: | 論文 |
| 言語: | 英語 |
| 出版事項: |
Taylor & Francis Group
2020-07-01
|
| 主題: | |
| オンライン･アクセス: | http://dx.doi.org/10.1080/23802359.2020.1779627 |
| _version_ | 1850393458673451008 |
|---|---|
| author | Huanhuan Chen Chao Liu Qing Liu Yu Song Lizhou Tang |
| author_facet | Huanhuan Chen Chao Liu Qing Liu Yu Song Lizhou Tang |
| author_sort | Huanhuan Chen |
| collection | DOAJ |
| container_title | Mitochondrial DNA. Part B. Resources |
| description | Ficus altissima Blume is a hemiepiphytic monoecious fig species of the genus Ficus in the family Moraceae. To better determine its phylogenetic location with respect to the other Ficus species, the complete plastid genome of F. altissima was sequenced. The whole plastome is 160,251 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,886 bp, one large single-copy (LSC) region of 88,470 bp, and one small single-copy (SSC) region of 20,009 bp. The overall GC content of the whole plastome is 35.9%. Further, maximum likelihood phylogenetic analyses was conducted using 29 complete fig plastomes, which support close relationships among F. altissima, F. benjamina, F. microcarpa, and F. consociata. |
| format | Article |
| id | doaj-art-bf751fdeca0b44afaa4268ca2be2cea7 |
| institution | Directory of Open Access Journals |
| issn | 2380-2359 |
| language | English |
| publishDate | 2020-07-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| spelling | doaj-art-bf751fdeca0b44afaa4268ca2be2cea72025-08-19T22:53:03ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-07-01532493249410.1080/23802359.2020.17796271779627The plastid genome of a large hemiepiphytic plants Ficus altissima (Moraceae)Huanhuan Chen0Chao Liu1Qing Liu2Yu Song3Lizhou Tang4College of Biological Resource and Food Engineering, Qujing Normal UniversityCollege of Biological Resource and Food Engineering, Qujing Normal UniversitySchool of Resources and Environment, Baoshan UniversityCenter for Integrative Conservation, Xishuangbanna Tropical Botanical Garden, Chinese Academy of SciencesCollege of Biological Resource and Food Engineering, Qujing Normal UniversityFicus altissima Blume is a hemiepiphytic monoecious fig species of the genus Ficus in the family Moraceae. To better determine its phylogenetic location with respect to the other Ficus species, the complete plastid genome of F. altissima was sequenced. The whole plastome is 160,251 bp in length, consisting of a pair of inverted repeat (IR) regions of 25,886 bp, one large single-copy (LSC) region of 88,470 bp, and one small single-copy (SSC) region of 20,009 bp. The overall GC content of the whole plastome is 35.9%. Further, maximum likelihood phylogenetic analyses was conducted using 29 complete fig plastomes, which support close relationships among F. altissima, F. benjamina, F. microcarpa, and F. consociata.http://dx.doi.org/10.1080/23802359.2020.1779627ficus altissimachloroplast genomephylogenetic analysis |
| spellingShingle | Huanhuan Chen Chao Liu Qing Liu Yu Song Lizhou Tang The plastid genome of a large hemiepiphytic plants Ficus altissima (Moraceae) ficus altissima chloroplast genome phylogenetic analysis |
| title | The plastid genome of a large hemiepiphytic plants Ficus altissima (Moraceae) |
| title_full | The plastid genome of a large hemiepiphytic plants Ficus altissima (Moraceae) |
| title_fullStr | The plastid genome of a large hemiepiphytic plants Ficus altissima (Moraceae) |
| title_full_unstemmed | The plastid genome of a large hemiepiphytic plants Ficus altissima (Moraceae) |
| title_short | The plastid genome of a large hemiepiphytic plants Ficus altissima (Moraceae) |
| title_sort | plastid genome of a large hemiepiphytic plants ficus altissima moraceae |
| topic | ficus altissima chloroplast genome phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1779627 |
| work_keys_str_mv | AT huanhuanchen theplastidgenomeofalargehemiepiphyticplantsficusaltissimamoraceae AT chaoliu theplastidgenomeofalargehemiepiphyticplantsficusaltissimamoraceae AT qingliu theplastidgenomeofalargehemiepiphyticplantsficusaltissimamoraceae AT yusong theplastidgenomeofalargehemiepiphyticplantsficusaltissimamoraceae AT lizhoutang theplastidgenomeofalargehemiepiphyticplantsficusaltissimamoraceae AT huanhuanchen plastidgenomeofalargehemiepiphyticplantsficusaltissimamoraceae AT chaoliu plastidgenomeofalargehemiepiphyticplantsficusaltissimamoraceae AT qingliu plastidgenomeofalargehemiepiphyticplantsficusaltissimamoraceae AT yusong plastidgenomeofalargehemiepiphyticplantsficusaltissimamoraceae AT lizhoutang plastidgenomeofalargehemiepiphyticplantsficusaltissimamoraceae |