Demographic Trends in Korean Native Cattle Explained Using Bovine SNP50 Beadchip
Linkage disequilibrium (LD) is the non-random association between the loci and it could give us a preliminary insight into the genetic history of the population. In the present study LD patterns and effective population size (Ne) of three Korean cattle breeds along with Chinese, Japanese and Mongoli...
| 發表在: | Genomics & Informatics |
|---|---|
| Main Authors: | Aditi Sharma, Dajeong Lim, Han-Ha Chai, Bong-Hwan Choi, Yongmin Cho |
| 格式: | Article |
| 語言: | 英语 |
| 出版: |
BioMed Central
2016-12-01
|
| 主題: | |
| 在線閱讀: | http://genominfo.org/upload/pdf/gni-14-230.pdf |
相似書籍
SNP-based diagnosis of robertsonian translocation 1;29 in Italian cattle breeds: frequency estimation and efficient detection
由: A. Bionda, et al.
出版: (2025-12-01)
由: A. Bionda, et al.
出版: (2025-12-01)
Application of a novel 50K SNP genotyping array to assess the genetic diversity and linkage disequilibrium in a farmed Pacific white shrimp (Litopenaeus vannamei) population
由: Baltasar F. Garcia, et al.
出版: (2021-07-01)
由: Baltasar F. Garcia, et al.
出版: (2021-07-01)
Characterisation of SNP haplotype structure in chemokine and chemokine receptor genes using CEPH pedigrees and statistical estimation
由: Clark Vanessa J, et al.
出版: (2004-03-01)
由: Clark Vanessa J, et al.
出版: (2004-03-01)
Accurate Estimation of Effective Population Size in the Korean Dairy Cattle Based on Linkage Disequilibrium Corrected by Genomic Relationship Matrix
由: Dong-Hyun Shin, et al.
出版: (2013-12-01)
由: Dong-Hyun Shin, et al.
出版: (2013-12-01)
SNP-Based Heritability of Osteochondrosis Dissecans in Hanoverian Warmblood Horses
由: Elisa Zimmermann, et al.
出版: (2023-04-01)
由: Elisa Zimmermann, et al.
出版: (2023-04-01)
Design of low density SNP chips for genotype imputation in layer chicken
由: Florian Herry, et al.
出版: (2018-12-01)
由: Florian Herry, et al.
出版: (2018-12-01)
Detection of QTL for Carcass Quality on Chromosome 6 by Exploiting Linkage and Linkage Disequilibrium in Hanwoo
由: J.-H. Lee, et al.
出版: (2012-01-01)
由: J.-H. Lee, et al.
出版: (2012-01-01)
Genome-Wide Association Mapping of Loci Associated with Plant Growth and Forage Production under Salt Stress in Alfalfa (Medicago sativa L.)
由: Xiang-Ping Liu, et al.
出版: (2017-05-01)
由: Xiang-Ping Liu, et al.
出版: (2017-05-01)
Identification of patterns related to linkage groups or disequilibrium by factor analysis
由: Cristiano Ferreira de Oliveira, et al.
出版: (2021-03-01)
由: Cristiano Ferreira de Oliveira, et al.
出版: (2021-03-01)
A method to assess linkage disequilibrium between CNVs and SNPs inside copy number variable regions
由: Nathan E Wineinger, et al.
出版: (2011-04-01)
由: Nathan E Wineinger, et al.
出版: (2011-04-01)
Patterns of linkage disequilibrium and haplotype distribution in disease candidate genes
由: Shen Hui, et al.
出版: (2004-05-01)
由: Shen Hui, et al.
出版: (2004-05-01)
Linkage Disequilibrium and Effective Population Size of Buffalo Populations of Iran, Turkey, Pakistan, and Egypt Using a Medium Density SNP Array
由: Shirin Rahimmadar, et al.
出版: (2021-12-01)
由: Shirin Rahimmadar, et al.
出版: (2021-12-01)
Exploring the genetic diversity and population structure of an ancient hexaploid wheat species Triticum sphaerococcum using SNP markers
由: Amit Kumar Mazumder, et al.
出版: (2024-12-01)
由: Amit Kumar Mazumder, et al.
出版: (2024-12-01)
Evaluation of the genome in bird breeding
由: A. F. Yakovlev, et al.
出版: (2017-12-01)
由: A. F. Yakovlev, et al.
出版: (2017-12-01)
Linkage disequilibrium patterns, population structure and diversity analysis in a worldwide durum wheat collection including Argentinian genotypes
由: Pablo Federico Roncallo, et al.
出版: (2021-04-01)
由: Pablo Federico Roncallo, et al.
出版: (2021-04-01)
Accuracy of Imputation of Microsatellite Markers from BovineSNP50 and BovineHD BeadChip in Hanwoo Population of Korea
由: Aditi Sharma, et al.
出版: (2018-03-01)
由: Aditi Sharma, et al.
出版: (2018-03-01)
Identification and validation of copy number variants in Italian Brown Swiss dairy cattle using Illumina Bovine SNP50 Beadchip®
由: Alessandro Bagnato, et al.
出版: (2015-09-01)
由: Alessandro Bagnato, et al.
出版: (2015-09-01)
Genome-wide association study identifies novel loci and candidate genes for rust resistance in wheat (Triticum aestivum L.)
由: Hanif Khan, et al.
出版: (2024-05-01)
由: Hanif Khan, et al.
出版: (2024-05-01)
Covariance Between Genotypic Effects and its Use for Genomic Inference in Half-Sib Families
由: Dörte Wittenburg, et al.
出版: (2016-09-01)
由: Dörte Wittenburg, et al.
出版: (2016-09-01)
Genome-Wide Association Study for Identification and Validation of Novel SNP Markers for Sr6 Stem Rust Resistance Gene in Bread Wheat
由: Amira M. I. Mourad, et al.
出版: (2018-03-01)
由: Amira M. I. Mourad, et al.
出版: (2018-03-01)
LD-annot: A Bioinformatics Tool to Automatically Provide Candidate SNPs With Annotations for Genetically Linked Genes
由: Julien Prunier, et al.
出版: (2019-11-01)
由: Julien Prunier, et al.
出版: (2019-11-01)
Bovine Genomics by James E. Womack.
由: Hasan eKhatib
出版: (2012-11-01)
由: Hasan eKhatib
出版: (2012-11-01)
Correction: Genome-wide association study of drought tolerance traits in sugar beet germplasms at the seedling stage
由: Wangsheng Li, et al.
出版: (2025-10-01)
由: Wangsheng Li, et al.
出版: (2025-10-01)
Genome-wide association study of drought tolerance traits in sugar beet germplasms at the seedling stage
由: Wangsheng Li, et al.
出版: (2023-07-01)
由: Wangsheng Li, et al.
出版: (2023-07-01)
Association mapping in bambara groundnut [Vigna subterranea (L.) Verdc.] reveals loci associated with agro-morphological traits
由: Charles U. Uba, et al.
出版: (2023-10-01)
由: Charles U. Uba, et al.
出版: (2023-10-01)
Design of experiments for fine-mapping quantitative trait loci in livestock populations
由: Dörte Wittenburg, et al.
出版: (2020-06-01)
由: Dörte Wittenburg, et al.
出版: (2020-06-01)
Whole genome sequencing of a wild swan goose population
由: Hongyu Ni, et al.
出版: (2023-02-01)
由: Hongyu Ni, et al.
出版: (2023-02-01)
Geographic stratification of linkage disequilibrium: a worldwide population study in a region of chromosome 22
由: González-Neira Anna, et al.
出版: (2004-11-01)
由: González-Neira Anna, et al.
出版: (2004-11-01)
Genetic Diversity and Selection Signal Analysis of Hu Sheep Based on SNP50K BeadChip
由: Keyan Ma, et al.
出版: (2024-09-01)
由: Keyan Ma, et al.
出版: (2024-09-01)
Multiple Linkage Disequilibrium Mapping Methods to Validate Additive Quantitative Trait Loci in Korean Native Cattle (Hanwoo)
由: Yi Li, et al.
出版: (2015-07-01)
由: Yi Li, et al.
出版: (2015-07-01)
Population genetic analysis of ascertained SNP data
由: Nielsen Rasmus
出版: (2004-03-01)
由: Nielsen Rasmus
出版: (2004-03-01)
Genome-wide analysis of zygotic linkage disequilibrium and its components in crossbred cattle
由: Jiang Qi, et al.
出版: (2012-07-01)
由: Jiang Qi, et al.
出版: (2012-07-01)
A Targeted Capture Linkage Map Anchors the Genome of the Schistosomiasis Vector Snail, Biomphalaria glabrata
由: Jacob A. Tennessen, et al.
出版: (2017-07-01)
由: Jacob A. Tennessen, et al.
出版: (2017-07-01)
Estimating effective population size using RADseq: Effects of SNP selection and sample size
由: Florianne Marandel, et al.
出版: (2020-02-01)
由: Florianne Marandel, et al.
出版: (2020-02-01)
Suitability of BovineSNP50 BeadChip for the evaluation of the Cervidae family diversity
由: R. Kasarda, et al.
出版: (2015-09-01)
由: R. Kasarda, et al.
出版: (2015-09-01)
Genetic diversity analysis and population structure of selected Ethiopian durum wheat (T. turgidum subsp. durum) landraces using DArTSeq markers
由: Bantewalu Hailekidan Dukamo, et al.
出版: (2024-12-01)
由: Bantewalu Hailekidan Dukamo, et al.
出版: (2024-12-01)
Population Genomic Structure and Genome-Wide Linkage Disequilibrium in Farmed Atlantic Salmon (Salmo salar L.) Using Dense SNP Genotypes
由: Agustin Barria, et al.
出版: (2018-12-01)
由: Agustin Barria, et al.
出版: (2018-12-01)
Haplotype tagging efficiency and tagSNP sets portability in worldwide populations in NAT2 gene
由: Audrey Sabbagh, et al.
出版: (2007-12-01)
由: Audrey Sabbagh, et al.
出版: (2007-12-01)
Genotyping-by-sequencing and SNP-arrays are complementary for detecting quantitative trait loci by tagging different haplotypes in association studies
由: Sandra S. Negro, et al.
出版: (2019-07-01)
由: Sandra S. Negro, et al.
出版: (2019-07-01)
Extent of linkage disequilibrium and effective population size of Korean Yorkshire swine
由: Donghyun Shin, et al.
出版: (2018-12-01)
由: Donghyun Shin, et al.
出版: (2018-12-01)
相似書籍
-
SNP-based diagnosis of robertsonian translocation 1;29 in Italian cattle breeds: frequency estimation and efficient detection
由: A. Bionda, et al.
出版: (2025-12-01) -
Application of a novel 50K SNP genotyping array to assess the genetic diversity and linkage disequilibrium in a farmed Pacific white shrimp (Litopenaeus vannamei) population
由: Baltasar F. Garcia, et al.
出版: (2021-07-01) -
Characterisation of SNP haplotype structure in chemokine and chemokine receptor genes using CEPH pedigrees and statistical estimation
由: Clark Vanessa J, et al.
出版: (2004-03-01) -
Accurate Estimation of Effective Population Size in the Korean Dairy Cattle Based on Linkage Disequilibrium Corrected by Genomic Relationship Matrix
由: Dong-Hyun Shin, et al.
出版: (2013-12-01) -
SNP-Based Heritability of Osteochondrosis Dissecans in Hanoverian Warmblood Horses
由: Elisa Zimmermann, et al.
出版: (2023-04-01)
