Presence and Persistence of <i>ESKAPEE</i> Bacteria before and after Hospital Wastewater Treatment
The metagenomic surveillance of antimicrobial resistance in wastewater has been suggested as a methodological tool to characterize the distribution, status, and trends of antibiotic-resistant bacteria. In this study, a cross-sectional collection of samples of hospital-associated raw and treated wast...
| 出版年: | Microorganisms |
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| 主要な著者: | , , , , , , , , |
| フォーマット: | 論文 |
| 言語: | 英語 |
| 出版事項: |
MDPI AG
2024-06-01
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| 主題: | |
| オンライン・アクセス: | https://www.mdpi.com/2076-2607/12/6/1231 |
| _version_ | 1850362180689461248 |
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| author | Miguel Galarde-López Maria Elena Velazquez-Meza Elizabeth Ernestina Godoy-Lozano Berta Alicia Carrillo-Quiroz Patricia Cornejo-Juárez Alejandro Sassoé-González Alfredo Ponce-de-León Pedro Saturno-Hernández Celia Mercedes Alpuche-Aranda |
| author_facet | Miguel Galarde-López Maria Elena Velazquez-Meza Elizabeth Ernestina Godoy-Lozano Berta Alicia Carrillo-Quiroz Patricia Cornejo-Juárez Alejandro Sassoé-González Alfredo Ponce-de-León Pedro Saturno-Hernández Celia Mercedes Alpuche-Aranda |
| author_sort | Miguel Galarde-López |
| collection | DOAJ |
| container_title | Microorganisms |
| description | The metagenomic surveillance of antimicrobial resistance in wastewater has been suggested as a methodological tool to characterize the distribution, status, and trends of antibiotic-resistant bacteria. In this study, a cross-sectional collection of samples of hospital-associated raw and treated wastewater were obtained from February to March 2020. Shotgun metagenomic sequencing and bioinformatic analysis were performed to characterize bacterial abundance and antimicrobial resistance gene analysis. The main bacterial phyla found in all the samples were as follows: <i>Proteobacteria</i>, <i>Bacteroides</i>, <i>Firmicutes</i>, and <i>Actinobacteria</i>. At the species level, <i>ESKAPEE</i> bacteria such as <i>E. coli</i> relative abundance decreased between raw and treated wastewater, but <i>S. aureus</i>, <i>A. baumannii</i>, and <i>P. aeruginosa</i> increased, as did the persistence of <i>K. pneumoniae</i> in both raw and treated wastewater. A total of 172 different ARGs were detected; <i>bla</i><sub>OXA</sub>, <i>bla</i><sub>VEB</sub>, <i>bla</i><sub>KPC</sub>, <i>bla</i><sub>GES</sub>, <i>mphE</i>, <i>mef</i>, <i>erm</i>, <i>msrE</i>, <i>AAC(6′)</i>, <i>ant(3″)</i>, <i>aadS</i>, <i>lnu</i>, <i>PBP-2</i>, <i>dfrA</i>, <i>vanA-G</i>, <i>tet</i>, and <i>sul</i> were found at the highest abundance and persistence. This study demonstrates the ability of <i>ESKAPEE</i> bacteria to survive tertiary treatment processes of hospital wastewater, as well as the persistence of clinically important antimicrobial resistance genes that are spreading in the environment. |
| format | Article |
| id | doaj-art-c2ddc576c7244ee98d1ad8f8f94decee |
| institution | Directory of Open Access Journals |
| issn | 2076-2607 |
| language | English |
| publishDate | 2024-06-01 |
| publisher | MDPI AG |
| record_format | Article |
| spelling | doaj-art-c2ddc576c7244ee98d1ad8f8f94decee2025-08-19T23:04:42ZengMDPI AGMicroorganisms2076-26072024-06-01126123110.3390/microorganisms12061231Presence and Persistence of <i>ESKAPEE</i> Bacteria before and after Hospital Wastewater TreatmentMiguel Galarde-López0Maria Elena Velazquez-Meza1Elizabeth Ernestina Godoy-Lozano2Berta Alicia Carrillo-Quiroz3Patricia Cornejo-Juárez4Alejandro Sassoé-González5Alfredo Ponce-de-León6Pedro Saturno-Hernández7Celia Mercedes Alpuche-Aranda8Centro de Investigación Sobre Enfermedades Infecciosas, Instituto Nacional de Salud Pública, Morelos 62100, MexicoCentro de Investigación Sobre Enfermedades Infecciosas, Instituto Nacional de Salud Pública, Morelos 62100, MexicoCentro de Investigación Sobre Enfermedades Infecciosas, Instituto Nacional de Salud Pública, Morelos 62100, MexicoCentro de Investigación Sobre Enfermedades Infecciosas, Instituto Nacional de Salud Pública, Morelos 62100, MexicoDepartamento de Infectología, Instituto Nacional de Cancerología, Tlalpan, Mexico City 14080, MexicoUnidad de Inteligencia Epidemiológica, Hospital Regional de Alta Especialidad de Ixtapaluca, Ixtapaluca 56530, MexicoLaboratorio Nacional de Máxima Seguridad para el Estudio de Tuberculosis y Enfermedades Emergentes, Instituto Nacional de Ciencias Médicas y Nutrición “Salvador Zubirán”, Mexico City 14080, MexicoCentro de Investigación en Evaluación de Encuestas, Instituto Nacional de Salud Pública, Morelos 62100, MexicoCentro de Investigación Sobre Enfermedades Infecciosas, Instituto Nacional de Salud Pública, Morelos 62100, MexicoThe metagenomic surveillance of antimicrobial resistance in wastewater has been suggested as a methodological tool to characterize the distribution, status, and trends of antibiotic-resistant bacteria. In this study, a cross-sectional collection of samples of hospital-associated raw and treated wastewater were obtained from February to March 2020. Shotgun metagenomic sequencing and bioinformatic analysis were performed to characterize bacterial abundance and antimicrobial resistance gene analysis. The main bacterial phyla found in all the samples were as follows: <i>Proteobacteria</i>, <i>Bacteroides</i>, <i>Firmicutes</i>, and <i>Actinobacteria</i>. At the species level, <i>ESKAPEE</i> bacteria such as <i>E. coli</i> relative abundance decreased between raw and treated wastewater, but <i>S. aureus</i>, <i>A. baumannii</i>, and <i>P. aeruginosa</i> increased, as did the persistence of <i>K. pneumoniae</i> in both raw and treated wastewater. A total of 172 different ARGs were detected; <i>bla</i><sub>OXA</sub>, <i>bla</i><sub>VEB</sub>, <i>bla</i><sub>KPC</sub>, <i>bla</i><sub>GES</sub>, <i>mphE</i>, <i>mef</i>, <i>erm</i>, <i>msrE</i>, <i>AAC(6′)</i>, <i>ant(3″)</i>, <i>aadS</i>, <i>lnu</i>, <i>PBP-2</i>, <i>dfrA</i>, <i>vanA-G</i>, <i>tet</i>, and <i>sul</i> were found at the highest abundance and persistence. This study demonstrates the ability of <i>ESKAPEE</i> bacteria to survive tertiary treatment processes of hospital wastewater, as well as the persistence of clinically important antimicrobial resistance genes that are spreading in the environment.https://www.mdpi.com/2076-2607/12/6/1231antimicrobial resistance<i>ESKAPEE</i>metagenomicresistomewastewaterpublic health |
| spellingShingle | Miguel Galarde-López Maria Elena Velazquez-Meza Elizabeth Ernestina Godoy-Lozano Berta Alicia Carrillo-Quiroz Patricia Cornejo-Juárez Alejandro Sassoé-González Alfredo Ponce-de-León Pedro Saturno-Hernández Celia Mercedes Alpuche-Aranda Presence and Persistence of <i>ESKAPEE</i> Bacteria before and after Hospital Wastewater Treatment antimicrobial resistance <i>ESKAPEE</i> metagenomic resistome wastewater public health |
| title | Presence and Persistence of <i>ESKAPEE</i> Bacteria before and after Hospital Wastewater Treatment |
| title_full | Presence and Persistence of <i>ESKAPEE</i> Bacteria before and after Hospital Wastewater Treatment |
| title_fullStr | Presence and Persistence of <i>ESKAPEE</i> Bacteria before and after Hospital Wastewater Treatment |
| title_full_unstemmed | Presence and Persistence of <i>ESKAPEE</i> Bacteria before and after Hospital Wastewater Treatment |
| title_short | Presence and Persistence of <i>ESKAPEE</i> Bacteria before and after Hospital Wastewater Treatment |
| title_sort | presence and persistence of i eskapee i bacteria before and after hospital wastewater treatment |
| topic | antimicrobial resistance <i>ESKAPEE</i> metagenomic resistome wastewater public health |
| url | https://www.mdpi.com/2076-2607/12/6/1231 |
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