Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content

The grain faba bean (<i>Vicia faba</i>) which belongs to the family of the Leguminosae, is a crop that is grown worldwide for consumption by humans and livestock. Despite being a rich source of plant-based protein and various agro-ecological advantages its usage is limited due to its ant...

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Main Authors: Felix Heinrich, Mehmet Gültas, Wolfgang Link, Armin Otto Schmitt
Format: Article
Language:English
Published: MDPI AG 2020-07-01
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Online Access:https://www.mdpi.com/2306-5729/5/3/63
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author Felix Heinrich
Mehmet Gültas
Wolfgang Link
Armin Otto Schmitt
author_facet Felix Heinrich
Mehmet Gültas
Wolfgang Link
Armin Otto Schmitt
author_sort Felix Heinrich
collection DOAJ
container_title Data
description The grain faba bean (<i>Vicia faba</i>) which belongs to the family of the Leguminosae, is a crop that is grown worldwide for consumption by humans and livestock. Despite being a rich source of plant-based protein and various agro-ecological advantages its usage is limited due to its anti-nutrients in the form of the seed-compounds vicine and convicine (V+C). While markers for a low V+C content exist the underlying pathway and the responsible genes have remained unknown for a long time and only recently a possible pathway and enzyme were found. Genetic research into <i>Vicia faba</i> is difficult due to the lack of a reference genome and the near exclusivity of V+C to the species. Here, we present sequence reads obtained through genotyping-by-sequencing of 20 <i>Vicia faba</i> lines with varying V+C contents. For each line, ∼3 million 150 bp paired end reads are available. This data can be useful in the genomic research of <i>Vicia faba</i> in general and its V+C content in particular.
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spelling doaj-art-ce7330aa89fe4dcf8cd0c93e0a48e4cc2025-08-19T22:47:57ZengMDPI AGData2306-57292020-07-01536310.3390/data5030063Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine ContentFelix Heinrich0Mehmet Gültas1Wolfgang Link2Armin Otto Schmitt3Breeding Informatics Group, Department of Animal Sciences, Georg-August University, Margarethe von Wrangell-Weg 7, 37075 Göttingen, GermanyBreeding Informatics Group, Department of Animal Sciences, Georg-August University, Margarethe von Wrangell-Weg 7, 37075 Göttingen, GermanyDepartment of Crop Sciences, Georg-August University, Von-Siebold-Str. 8, 37075 Göttingen, GermanyBreeding Informatics Group, Department of Animal Sciences, Georg-August University, Margarethe von Wrangell-Weg 7, 37075 Göttingen, GermanyThe grain faba bean (<i>Vicia faba</i>) which belongs to the family of the Leguminosae, is a crop that is grown worldwide for consumption by humans and livestock. Despite being a rich source of plant-based protein and various agro-ecological advantages its usage is limited due to its anti-nutrients in the form of the seed-compounds vicine and convicine (V+C). While markers for a low V+C content exist the underlying pathway and the responsible genes have remained unknown for a long time and only recently a possible pathway and enzyme were found. Genetic research into <i>Vicia faba</i> is difficult due to the lack of a reference genome and the near exclusivity of V+C to the species. Here, we present sequence reads obtained through genotyping-by-sequencing of 20 <i>Vicia faba</i> lines with varying V+C contents. For each line, ∼3 million 150 bp paired end reads are available. This data can be useful in the genomic research of <i>Vicia faba</i> in general and its V+C content in particular.https://www.mdpi.com/2306-5729/5/3/63<i>Vicia faba</i>GBSvicine/convicine
spellingShingle Felix Heinrich
Mehmet Gültas
Wolfgang Link
Armin Otto Schmitt
Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content
<i>Vicia faba</i>
GBS
vicine/convicine
title Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content
title_full Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content
title_fullStr Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content
title_full_unstemmed Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content
title_short Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content
title_sort genotyping by sequencing reads of 20 i vicia faba i lines with high and low vicine and convicine content
topic <i>Vicia faba</i>
GBS
vicine/convicine
url https://www.mdpi.com/2306-5729/5/3/63
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