Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content
The grain faba bean (<i>Vicia faba</i>) which belongs to the family of the Leguminosae, is a crop that is grown worldwide for consumption by humans and livestock. Despite being a rich source of plant-based protein and various agro-ecological advantages its usage is limited due to its ant...
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| Format: | Article |
| Language: | English |
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MDPI AG
2020-07-01
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| Online Access: | https://www.mdpi.com/2306-5729/5/3/63 |
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| author | Felix Heinrich Mehmet Gültas Wolfgang Link Armin Otto Schmitt |
| author_facet | Felix Heinrich Mehmet Gültas Wolfgang Link Armin Otto Schmitt |
| author_sort | Felix Heinrich |
| collection | DOAJ |
| container_title | Data |
| description | The grain faba bean (<i>Vicia faba</i>) which belongs to the family of the Leguminosae, is a crop that is grown worldwide for consumption by humans and livestock. Despite being a rich source of plant-based protein and various agro-ecological advantages its usage is limited due to its anti-nutrients in the form of the seed-compounds vicine and convicine (V+C). While markers for a low V+C content exist the underlying pathway and the responsible genes have remained unknown for a long time and only recently a possible pathway and enzyme were found. Genetic research into <i>Vicia faba</i> is difficult due to the lack of a reference genome and the near exclusivity of V+C to the species. Here, we present sequence reads obtained through genotyping-by-sequencing of 20 <i>Vicia faba</i> lines with varying V+C contents. For each line, ∼3 million 150 bp paired end reads are available. This data can be useful in the genomic research of <i>Vicia faba</i> in general and its V+C content in particular. |
| format | Article |
| id | doaj-art-ce7330aa89fe4dcf8cd0c93e0a48e4cc |
| institution | Directory of Open Access Journals |
| issn | 2306-5729 |
| language | English |
| publishDate | 2020-07-01 |
| publisher | MDPI AG |
| record_format | Article |
| spelling | doaj-art-ce7330aa89fe4dcf8cd0c93e0a48e4cc2025-08-19T22:47:57ZengMDPI AGData2306-57292020-07-01536310.3390/data5030063Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine ContentFelix Heinrich0Mehmet Gültas1Wolfgang Link2Armin Otto Schmitt3Breeding Informatics Group, Department of Animal Sciences, Georg-August University, Margarethe von Wrangell-Weg 7, 37075 Göttingen, GermanyBreeding Informatics Group, Department of Animal Sciences, Georg-August University, Margarethe von Wrangell-Weg 7, 37075 Göttingen, GermanyDepartment of Crop Sciences, Georg-August University, Von-Siebold-Str. 8, 37075 Göttingen, GermanyBreeding Informatics Group, Department of Animal Sciences, Georg-August University, Margarethe von Wrangell-Weg 7, 37075 Göttingen, GermanyThe grain faba bean (<i>Vicia faba</i>) which belongs to the family of the Leguminosae, is a crop that is grown worldwide for consumption by humans and livestock. Despite being a rich source of plant-based protein and various agro-ecological advantages its usage is limited due to its anti-nutrients in the form of the seed-compounds vicine and convicine (V+C). While markers for a low V+C content exist the underlying pathway and the responsible genes have remained unknown for a long time and only recently a possible pathway and enzyme were found. Genetic research into <i>Vicia faba</i> is difficult due to the lack of a reference genome and the near exclusivity of V+C to the species. Here, we present sequence reads obtained through genotyping-by-sequencing of 20 <i>Vicia faba</i> lines with varying V+C contents. For each line, ∼3 million 150 bp paired end reads are available. This data can be useful in the genomic research of <i>Vicia faba</i> in general and its V+C content in particular.https://www.mdpi.com/2306-5729/5/3/63<i>Vicia faba</i>GBSvicine/convicine |
| spellingShingle | Felix Heinrich Mehmet Gültas Wolfgang Link Armin Otto Schmitt Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content <i>Vicia faba</i> GBS vicine/convicine |
| title | Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content |
| title_full | Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content |
| title_fullStr | Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content |
| title_full_unstemmed | Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content |
| title_short | Genotyping by Sequencing Reads of 20 <i>Vicia faba</i> Lines with High and Low Vicine and Convicine Content |
| title_sort | genotyping by sequencing reads of 20 i vicia faba i lines with high and low vicine and convicine content |
| topic | <i>Vicia faba</i> GBS vicine/convicine |
| url | https://www.mdpi.com/2306-5729/5/3/63 |
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