The complete chloroplast genome sequence of Camellias (Camellia fangchengensis)
Camellia fangchengensis is endemic to Fangcheng, Guangxi Province, China, and its populations have been shrinking. In the present study, we report the complete chloroplast genome of C. fangchengensis using HiSeq 2500 sequencing technology. The complete chloroplast genome length is 157,095 bp. The ch...
| Published in: | Mitochondrial DNA. Part B. Resources |
|---|---|
| Main Authors: | , |
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2018-01-01
|
| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2017.1419086 |
| _version_ | 1849888274567397376 |
|---|---|
| author | Yuan Liu Yan Han |
| author_facet | Yuan Liu Yan Han |
| author_sort | Yuan Liu |
| collection | DOAJ |
| container_title | Mitochondrial DNA. Part B. Resources |
| description | Camellia fangchengensis is endemic to Fangcheng, Guangxi Province, China, and its populations have been shrinking. In the present study, we report the complete chloroplast genome of C. fangchengensis using HiSeq 2500 sequencing technology. The complete chloroplast genome length is 157,095 bp. The chloroplast genome has 43 tRNA genes, six rRNA genes, and 97 protein-coding genes. Moreover, 18 genes have multiple copies in the chloroplast genome. A total of 146 genes are present in the chloroplast genome. Maximum likelihood phylogenetic tree based on 11 complete chloroplast genomes revealed that C. fangchengensis is closely related to C. pitardii. The complete chloroplast genome of C. fangchengensis would help to conserving the precious natural populations. |
| format | Article |
| id | doaj-art-ce9fc4e26f2e4fc085e0eea836f417b9 |
| institution | Directory of Open Access Journals |
| issn | 2380-2359 |
| language | English |
| publishDate | 2018-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| spelling | doaj-art-ce9fc4e26f2e4fc085e0eea836f417b92025-08-20T01:05:34ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592018-01-0131343510.1080/23802359.2017.14190861419086The complete chloroplast genome sequence of Camellias (Camellia fangchengensis)Yuan Liu0Yan Han1Germplasm Bank of Wild Species in Southwest China, Kunming Institute of Botany, The Chinese Academy of SciencesKunming University of Science and TechnologyCamellia fangchengensis is endemic to Fangcheng, Guangxi Province, China, and its populations have been shrinking. In the present study, we report the complete chloroplast genome of C. fangchengensis using HiSeq 2500 sequencing technology. The complete chloroplast genome length is 157,095 bp. The chloroplast genome has 43 tRNA genes, six rRNA genes, and 97 protein-coding genes. Moreover, 18 genes have multiple copies in the chloroplast genome. A total of 146 genes are present in the chloroplast genome. Maximum likelihood phylogenetic tree based on 11 complete chloroplast genomes revealed that C. fangchengensis is closely related to C. pitardii. The complete chloroplast genome of C. fangchengensis would help to conserving the precious natural populations.http://dx.doi.org/10.1080/23802359.2017.1419086camellia fangchengensischloroplast genomeendangered species |
| spellingShingle | Yuan Liu Yan Han The complete chloroplast genome sequence of Camellias (Camellia fangchengensis) camellia fangchengensis chloroplast genome endangered species |
| title | The complete chloroplast genome sequence of Camellias (Camellia fangchengensis) |
| title_full | The complete chloroplast genome sequence of Camellias (Camellia fangchengensis) |
| title_fullStr | The complete chloroplast genome sequence of Camellias (Camellia fangchengensis) |
| title_full_unstemmed | The complete chloroplast genome sequence of Camellias (Camellia fangchengensis) |
| title_short | The complete chloroplast genome sequence of Camellias (Camellia fangchengensis) |
| title_sort | complete chloroplast genome sequence of camellias camellia fangchengensis |
| topic | camellia fangchengensis chloroplast genome endangered species |
| url | http://dx.doi.org/10.1080/23802359.2017.1419086 |
| work_keys_str_mv | AT yuanliu thecompletechloroplastgenomesequenceofcamelliascamelliafangchengensis AT yanhan thecompletechloroplastgenomesequenceofcamelliascamelliafangchengensis AT yuanliu completechloroplastgenomesequenceofcamelliascamelliafangchengensis AT yanhan completechloroplastgenomesequenceofcamelliascamelliafangchengensis |