Regulatory and evolutionary impact of DNA methylation in two songbird species and their naturally occurring F1 hybrids

Abstract Background Regulation of transcription by DNA methylation in 5’-CpG-3’ context is a widespread mechanism allowing differential expression of genetically identical cells to persist throughout development. Consequently, differences in DNA methylation can reinforce variation in gene expression...

Full description

Bibliographic Details
Published in:	BMC Biology
Main Authors:	Jesper Boman, Anna Qvarnström, Carina F. Mugal
Format:	Article
Language:	English
Published:	BMC 2024-05-01
Subjects:	DNA methylation Speciation Transcriptomics Epigenomics
Online Access:	https://doi.org/10.1186/s12915-024-01920-2

Similar Items

Epigenomics in an extraterrestrial environment: organ-specific alteration of DNA methylation and gene expression elicited by spaceflight in Arabidopsis thaliana
by: Mingqi Zhou, et al.
Published: (2019-03-01)

Stress induced gene expression drives transient DNA methylation changes at adjacent repetitive elements
by: David Secco, et al.
Published: (2015-07-01)

DNA Methylation of Fluoxetine Response in Child and Adolescence: Preliminary Results
by: Martinez-Pinteño A, et al.
Published: (2021-04-01)

Osteogenic Commitment of Human Periodontal Ligament Cells Is Predetermined by Methylation, Chromatin Accessibility and Expression of Key Transcription Factors
by: Rahyza I. F. Assis, et al.
Published: (2022-03-01)

eDAVE – Extension of GDC data analysis, visualization, and exploration tools
by: Jan Bińkowski, et al.
Published: (2023-01-01)

Global DNA methylation remodeling during direct reprogramming of fibroblasts to neurons
by: Chongyuan Luo, et al.
Published: (2019-01-01)

Maternal blood metal concentrations and whole blood DNA methylation during pregnancy in the Early Autism Risk Longitudinal Investigation (EARLI)
by: Max T. Aung, et al.
Published: (2022-03-01)

A review of the use of tumour DNA methylation for breast cancer subtyping and prediction of outcomes
by: Elaheh Zarean, et al.
Published: (2025-07-01)

Transcorneal electrical stimulation restores DNA methylation changes in retinal degeneration
by: Ben Yi Tew, et al.
Published: (2024-12-01)

Novel DNA methylation changes in mouse lungs associated with chronic smoking
by: Chinonye Doris Onuzulu, et al.
Published: (2024-12-01)

The early pregnancy placenta foreshadows DNA methylation alterations of solid tumors
by: Akpéli V. Nordor, et al.
Published: (2017-09-01)

DNA methylation of exercise-responsive genes differs between trained and untrained men
by: Carla Geiger, et al.
Published: (2024-07-01)

Methylation patterns at the adjacent CpG sites within enhancers are a part of cell identity
by: Olga Taryma-Leśniak, et al.
Published: (2024-10-01)

A genome-wide study of DNA methylation in white blood cells and asthma in Latino children and youth
by: Yale Jiang, et al.
Published: (2021-05-01)

Aberrant <i>AHRR</i>, <i>ADAMTS2</i> and <i>FAM184</i> DNA Methylation: Candidate Biomarkers in the Oral Rinse of Heavy Smokers
by: Hernán Guillermo Hernández, et al.
Published: (2023-06-01)

Simple workflow for genome and methylation analyses of ejaculated bovine spermatozoa with low sperm input
by: Bradford W Daigneault, et al.
Published: (2020-03-01)

The Relevance of DNA Methylation and Histone Modification in Periodontitis: A Scoping Review
by: Andrew Liaw, et al.
Published: (2022-10-01)

The emerging field of opportunities for single-cell DNA methylation studies in hematology and beyond
by: Leone Albinati, et al.
Published: (2023-10-01)

-Omic Approaches and Treatment Response in Rheumatoid Arthritis
by: Adela Madrid-Paredes, et al.
Published: (2022-08-01)

An epigenetic signature of advanced colorectal cancer metastasis
by: Euan J. Rodger, et al.
Published: (2023-06-01)

DNA methylation and type 2 diabetes: a systematic review
by: Nikhil Nadiger, et al.
Published: (2024-05-01)

Sex-specific DNA methylation differences in Alzheimer’s disease pathology
by: Lanyu Zhang, et al.
Published: (2021-04-01)

Shedding light on DNA methylation and its clinical implications: the impact of long-read-based nanopore technology
by: Alexandra Chera, et al.
Published: (2024-12-01)

Longitudinal analysis of epigenome-wide DNA methylation reveals novel smoking-related loci in African Americans
by: Jiaxuan Liu, et al.
Published: (2019-02-01)

Identifying mislabeled and contaminated DNA methylation microarray data: an extended quality control toolset with examples from GEO
by: Jonathan A. Heiss, et al.
Published: (2018-06-01)

DNA methylation and obesity traits: An epigenome-wide association study. The REGICOR study
by: Sergi Sayols-Baixeras, et al.
Published: (2017-10-01)

Smoking and blood DNA methylation: an epigenome-wide association study and assessment of reversibility
by: Pierre-Antoine Dugué, et al.
Published: (2020-04-01)

Non-small Cell Lung Cancer Epigenomes Exhibit Altered DNA Methylation in Smokers and Never-smokers
by: Jennifer A. Karlow, et al.
Published: (2023-10-01)

DNA Methylation in Rice and Relevance for Breeding
by: Sophie Lanciano, et al.
Published: (2017-07-01)

Methylation Genome-Wide Profiling in Lowly and Highly Efficient Somatic Cell Nuclear Transfer in Pigs
by: Maciej Grzybek, et al.
Published: (2023-04-01)

Epigenetics Approaches toward Precision Medicine for Idiopathic Pulmonary Fibrosis: Focus on DNA Methylation
by: Wiwin Is Effendi, et al.
Published: (2023-03-01)

Impact of tobacco, alcohol, and marijuana on genome-wide DNA methylation and its relationship with hypertension
by: Natàlia Carreras-Gallo, et al.
Published: (2023-12-01)

Transcriptomics and methylomics in chronic periodontitis with tobacco use: a pilot study
by: Young-Dan Cho, et al.
Published: (2017-08-01)

Fathers’ preconception smoking and offspring DNA methylation
by: Negusse Tadesse Kitaba, et al.
Published: (2023-08-01)

Residential surrounding greenness and DNA methylation: An epigenome-wide association study
by: Rongbin Xu, et al.
Published: (2021-09-01)

A Comparative Analysis of 5-Azacytidine- and Zebularine-Induced DNA Demethylation
by: Patrick T. Griffin, et al.
Published: (2016-09-01)

Tissue-specific DNA methylation is conserved across human, mouse, and rat, and driven by primary sequence conservation
by: Jia Zhou, et al.
Published: (2017-09-01)

Classification of Colon Cancer Patients Based on the Methylation Patterns of Promoters
by: Wonyoung Choi, et al.
Published: (2016-06-01)

The Absence of C-5 DNA Methylation in <i>Leishmania donovani</i> Allows DNA Enrichment from Complex Samples
by: Bart Cuypers, et al.
Published: (2020-08-01)

Optimizing methodologies for PCR-based DNA methylation analysis
by: Hernán G. Hernández, et al.
Published: (2013-10-01)