Transcriptomic Characterization of the Human Insular Cortex and Claustrum
The insular cortex has been linked to a multitude of functions. In contrast, the nearby claustrum is a densely connected subcortical region with unclear function. To view the insula-claustrum region from the molecular perspective we analyzed the transcriptomic profile of these areas in six adult and...
| الحاوية / القاعدة: | Frontiers in Neuroanatomy |
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| المؤلفون الرئيسيون: | , , |
| التنسيق: | مقال |
| اللغة: | الإنجليزية |
| منشور في: |
Frontiers Media S.A.
2019-11-01
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| الموضوعات: | |
| الوصول للمادة أونلاين: | https://www.frontiersin.org/article/10.3389/fnana.2019.00094/full |
| _version_ | 1852753079983669248 |
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| author | Christine Ibrahim Christine Ibrahim Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Leon French Leon French Leon French Leon French |
| author_facet | Christine Ibrahim Christine Ibrahim Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Leon French Leon French Leon French Leon French |
| author_sort | Christine Ibrahim |
| collection | DOAJ |
| container_title | Frontiers in Neuroanatomy |
| description | The insular cortex has been linked to a multitude of functions. In contrast, the nearby claustrum is a densely connected subcortical region with unclear function. To view the insula-claustrum region from the molecular perspective we analyzed the transcriptomic profile of these areas in six adult and four fetal human brains. We identified marker genes with specific expression and performed transcriptome-wide tests for enrichment of biological processes, molecular functions, and cellular components. In addition, specific insular and claustral expression of genes pertaining to diseases, addiction, and depression was tested. At the anatomical level, we used brain-wide analyses to determine the specificity of our results and to determine the transcriptomic similarity of the insula-claustrum region. We found UCMA to be the most significantly enriched gene in the insular cortex and confirmed specific expression of NR4A2, NTNG2, and LXN in the claustrum. Furthermore, the insula was found to have enriched expression of genes associated with mood disorders, learning, cardiac muscle contraction, oxygen transport, glutamate and dopamine signaling. Specific expression in the claustrum was enriched for genes pertaining to human immunodeficiency virus (HIV), severe intellectual disability, epileptic encephalopathy, intracellular transport, spine development, and macroautophagy. We tested for enrichment of genes related to addiction and depression, but they were generally not highly specific to the insula-claustrum region. Exceptions include high insular expression of genes linked to cocaine abuse and genes associated with ever smoking in the claustrum. Brain-wide, we find that markers of the adult claustrum are most specifically expressed in the fetal and adult insula. Altogether, our results provide a novel molecular perspective on the unique properties of the insula and claustrum. |
| format | Article |
| id | doaj-art-ddcc11252b424ffba4d443bbd801cb2c |
| institution | Directory of Open Access Journals |
| issn | 1662-5129 |
| language | English |
| publishDate | 2019-11-01 |
| publisher | Frontiers Media S.A. |
| record_format | Article |
| spelling | doaj-art-ddcc11252b424ffba4d443bbd801cb2c2025-08-19T20:59:14ZengFrontiers Media S.A.Frontiers in Neuroanatomy1662-51292019-11-011310.3389/fnana.2019.00094468266Transcriptomic Characterization of the Human Insular Cortex and ClaustrumChristine Ibrahim0Christine Ibrahim1Bernard Le Foll2Bernard Le Foll3Bernard Le Foll4Bernard Le Foll5Bernard Le Foll6Bernard Le Foll7Bernard Le Foll8Leon French9Leon French10Leon French11Leon French12Translational Addiction Research Laboratory, Centre for Addiction and Mental Health, Toronto, ON, CanadaDepartment of Pharmacology and Toxicology, University of Toronto, Toronto, ON, CanadaTranslational Addiction Research Laboratory, Centre for Addiction and Mental Health, Toronto, ON, CanadaDepartment of Pharmacology and Toxicology, University of Toronto, Toronto, ON, CanadaAddictions Division, Centre for Addiction and Mental Health, Toronto, ON, CanadaInstitute of Medical Science, University of Toronto, Toronto, ON, CanadaDepartment of Family and Community Medicine, University of Toronto, Toronto, ON, CanadaDivision of Brain and Therapeutics, Department of Psychiatry, University of Toronto, Toronto, ON, CanadaCampbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON, CanadaInstitute of Medical Science, University of Toronto, Toronto, ON, CanadaDivision of Brain and Therapeutics, Department of Psychiatry, University of Toronto, Toronto, ON, CanadaCampbell Family Mental Health Research Institute, Centre for Addiction and Mental Health, Toronto, ON, CanadaKrembil Centre for Neuroinformatics, Centre for Addiction and Mental Health, Toronto, ON, CanadaThe insular cortex has been linked to a multitude of functions. In contrast, the nearby claustrum is a densely connected subcortical region with unclear function. To view the insula-claustrum region from the molecular perspective we analyzed the transcriptomic profile of these areas in six adult and four fetal human brains. We identified marker genes with specific expression and performed transcriptome-wide tests for enrichment of biological processes, molecular functions, and cellular components. In addition, specific insular and claustral expression of genes pertaining to diseases, addiction, and depression was tested. At the anatomical level, we used brain-wide analyses to determine the specificity of our results and to determine the transcriptomic similarity of the insula-claustrum region. We found UCMA to be the most significantly enriched gene in the insular cortex and confirmed specific expression of NR4A2, NTNG2, and LXN in the claustrum. Furthermore, the insula was found to have enriched expression of genes associated with mood disorders, learning, cardiac muscle contraction, oxygen transport, glutamate and dopamine signaling. Specific expression in the claustrum was enriched for genes pertaining to human immunodeficiency virus (HIV), severe intellectual disability, epileptic encephalopathy, intracellular transport, spine development, and macroautophagy. We tested for enrichment of genes related to addiction and depression, but they were generally not highly specific to the insula-claustrum region. Exceptions include high insular expression of genes linked to cocaine abuse and genes associated with ever smoking in the claustrum. Brain-wide, we find that markers of the adult claustrum are most specifically expressed in the fetal and adult insula. Altogether, our results provide a novel molecular perspective on the unique properties of the insula and claustrum.https://www.frontiersin.org/article/10.3389/fnana.2019.00094/fulltranscriptomicsinsulaclaustrumaddictiondepressionepilepsy |
| spellingShingle | Christine Ibrahim Christine Ibrahim Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Bernard Le Foll Leon French Leon French Leon French Leon French Transcriptomic Characterization of the Human Insular Cortex and Claustrum transcriptomics insula claustrum addiction depression epilepsy |
| title | Transcriptomic Characterization of the Human Insular Cortex and Claustrum |
| title_full | Transcriptomic Characterization of the Human Insular Cortex and Claustrum |
| title_fullStr | Transcriptomic Characterization of the Human Insular Cortex and Claustrum |
| title_full_unstemmed | Transcriptomic Characterization of the Human Insular Cortex and Claustrum |
| title_short | Transcriptomic Characterization of the Human Insular Cortex and Claustrum |
| title_sort | transcriptomic characterization of the human insular cortex and claustrum |
| topic | transcriptomics insula claustrum addiction depression epilepsy |
| url | https://www.frontiersin.org/article/10.3389/fnana.2019.00094/full |
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