Leveraging explainable multi-scale features for fine-grained circRNA-miRNA interaction prediction
Abstract Background Circular RNAs (circRNAs) and microRNAs (miRNAs) interactions have essential implications in various biological processes and diseases. Computational science approaches have emerged as powerful tools for studying and predicting these intricate molecular interactions, garnering con...
| 出版年: | BMC Biology |
|---|---|
| 主要な著者: | Li Peng, Wang Wang, Zongyi Yang, Xiangzheng Fu, Wei Liang, Dongsheng Cao |
| フォーマット: | 論文 |
| 言語: | 英語 |
| 出版事項: |
BMC
2025-05-01
|
| 主題: | |
| オンライン・アクセス: | https://doi.org/10.1186/s12915-025-02227-6 |
類似資料
Crosstalk Among circRNA/lncRNA, miRNA, and mRNA in Osteoarthritis
著者:: Hui Kong, 等
出版事項: (2021-12-01)
著者:: Hui Kong, 等
出版事項: (2021-12-01)
Comprehensive analysis of the circRNA expression profile and circRNA-miRNA-mRNA network in pelvic organ prolapse
著者:: Qian Wang, 等
出版事項: (2025-01-01)
著者:: Qian Wang, 等
出版事項: (2025-01-01)
BJLD-CMI: a predictive circRNA-miRNA interactions model combining multi-angle feature information
著者:: Yi-Xin Zhao, 等
出版事項: (2024-05-01)
著者:: Yi-Xin Zhao, 等
出版事項: (2024-05-01)
GCNCMI: A Graph Convolutional Neural Network Approach for Predicting circRNA-miRNA Interactions
著者:: Jie He, 等
出版事項: (2022-08-01)
著者:: Jie He, 等
出版事項: (2022-08-01)
Identification of potentially functional circRNAs and prediction of the circRNA-miRNA-hub gene network in mice with primary blast lung injury
著者:: Qianying Lu, 等
出版事項: (2023-10-01)
著者:: Qianying Lu, 等
出版事項: (2023-10-01)
Mechanism of Action of circRNA/miRNA Network in DLBCL
著者:: Elena Golovina, 等
出版事項: (2025-03-01)
著者:: Elena Golovina, 等
出版事項: (2025-03-01)
The roles of circRNA–miRNA–mRNA networks in the development and treatment of osteoporosis
著者:: Manqi Gao, 等
出版事項: (2022-08-01)
著者:: Manqi Gao, 等
出版事項: (2022-08-01)
Predicting circRNA-Disease Associations Based on circRNA Expression Similarity and Functional Similarity
著者:: Yongtian Wang, 等
出版事項: (2019-09-01)
著者:: Yongtian Wang, 等
出版事項: (2019-09-01)
Progress of circRNA/lncRNA-miRNA-mRNA axis in atrial fibrillation
著者:: Jia-le Wen, 等
出版事項: (2023-12-01)
著者:: Jia-le Wen, 等
出版事項: (2023-12-01)
Integrated Analysis of circRNA-miRNA-mRNA ceRNA Network in Cardiac Hypertrophy
著者:: Yang-Hao Chen, 等
出版事項: (2022-02-01)
著者:: Yang-Hao Chen, 等
出版事項: (2022-02-01)
SGCNCMI: A New Model Combining Multi-Modal Information to Predict circRNA-Related miRNAs, Diseases and Genes
著者:: Chang-Qing Yu, 等
出版事項: (2022-09-01)
著者:: Chang-Qing Yu, 等
出版事項: (2022-09-01)
Competitive endogenous network of circRNA, lncRNA, and miRNA in osteosarcoma chemoresistance
著者:: Shuang Qin, 等
出版事項: (2023-09-01)
著者:: Shuang Qin, 等
出版事項: (2023-09-01)
iHofman: a predictive model integrating high-order and low-order features with weighted attention mechanisms for circRNA-miRNA interactions
著者:: Chang-Qing Yu, 等
出版事項: (2025-06-01)
著者:: Chang-Qing Yu, 等
出版事項: (2025-06-01)
Emerging roles of CircRNA-miRNA networks in cancer development and therapeutic response
著者:: Mehrdad Hashemi, 等
出版事項: (2025-02-01)
著者:: Mehrdad Hashemi, 等
出版事項: (2025-02-01)
Identification of circRNA/miRNA/mRNA regulatory network involving (+)-catechin ameliorates diabetic nephropathy mice
著者:: Chao Chen, 等
出版事項: (2022-05-01)
著者:: Chao Chen, 等
出版事項: (2022-05-01)
Comprehensive Analysis of circRNA-miRNA-mRNA Regulatory Network and Novel Potential Biomarkers in Acute Myocardial Infarction
著者:: Jiahe Wu, 等
出版事項: (2022-07-01)
著者:: Jiahe Wu, 等
出版事項: (2022-07-01)
CircRNA-miRNA-mRNA networks in plasma extracellular vesicles as biomarkers for first-onset schizophrenia
著者:: Xinzhe Du, 等
出版事項: (2025-07-01)
著者:: Xinzhe Du, 等
出版事項: (2025-07-01)
KGDCMI: A New Approach for Predicting circRNA–miRNA Interactions From Multi-Source Information Extraction and Deep Learning
著者:: Xin-Fei Wang, 等
出版事項: (2022-08-01)
著者:: Xin-Fei Wang, 等
出版事項: (2022-08-01)
Construction of an interactome network among circRNA-miRNA-mRNA reveals new biomarkers in hBMSCs osteogenic differentiation
著者:: Kaixin Su, 等
出版事項: (2024-10-01)
著者:: Kaixin Su, 等
出版事項: (2024-10-01)
Evidence and perspectives on miRNA, circRNA, and lncRNA in myocardial ischemia-reperfusion injury: a bibliometric study
著者:: Xiaowen Bo, 等
出版事項: (2025-01-01)
著者:: Xiaowen Bo, 等
出版事項: (2025-01-01)
Molecular Mechanisms of circRNA–miRNA–mRNA Interactions in the Regulation of Goose Liver Development
著者:: Shuibing Liu, 等
出版事項: (2024-03-01)
著者:: Shuibing Liu, 等
出版事項: (2024-03-01)
Analysis of a circRNA-, miRNA-, and mRNA-associated ceRNA network reveals potential biomarkers in preeclampsia a ceRNA network in preeclampsia
著者:: Xiaoxiao Xu, 等
出版事項: (2021-01-01)
著者:: Xiaoxiao Xu, 等
出版事項: (2021-01-01)
circRNA_8521 promotes Senecavirus A infection by sponging miRNA-324 to regulate LC3A
著者:: Xiwang Yang, 等
出版事項: (2024-04-01)
著者:: Xiwang Yang, 等
出版事項: (2024-04-01)
Construction of circRNA–miRNA–mRNA ceRNA regulatory network and screening of diagnostic targets for tuberculosis
著者:: Xinyi Pu, 等
出版事項: (2024-12-01)
著者:: Xinyi Pu, 等
出版事項: (2024-12-01)
Identification of circRNA Biomarker for Gastric Cancer through Integrated Analysis
著者:: Md. Tofazzal Hossain, 等
出版事項: (2022-03-01)
著者:: Md. Tofazzal Hossain, 等
出版事項: (2022-03-01)
CircRNA and lncRNA-associated competing endogenous RNA networks in medulloblastoma: a scoping review
著者:: Fatemeh Nejadi Orang, 等
出版事項: (2024-07-01)
著者:: Fatemeh Nejadi Orang, 等
出版事項: (2024-07-01)
Screening of circRNAs Associated with Secondary Wool Follicle Development in Fine-Wool Sheep and Construction of Their ceRNA Network
著者:: Yu Luo, 等
出版事項: (2025-09-01)
著者:: Yu Luo, 等
出版事項: (2025-09-01)
Integrated analysis of lncRNA/circRNA–miRNA–mRNA in the proliferative phase of liver regeneration in mice with liver fibrosis
著者:: Qian Wang, 等
出版事項: (2023-07-01)
著者:: Qian Wang, 等
出版事項: (2023-07-01)
Deregulation of ncRNA in Neurodegenerative Disease: Focus on circRNA, lncRNA and miRNA in Amyotrophic Lateral Sclerosis
著者:: Paola Ruffo, 等
出版事項: (2021-12-01)
著者:: Paola Ruffo, 等
出版事項: (2021-12-01)
CircRNA/miRNA/mRNA axis participates in the progression of partial bladder outlet obstruction
著者:: Baoyi Zhu, 等
出版事項: (2022-11-01)
著者:: Baoyi Zhu, 等
出版事項: (2022-11-01)
Corrigendum: Identification of circRNA biomarker for gastric cancer through integrated analysis
著者:: Md. Tofazzal Hossain, 等
出版事項: (2023-07-01)
著者:: Md. Tofazzal Hossain, 等
出版事項: (2023-07-01)
Identification of circRNA–miRNA–mRNA regulatory network associated to the autism spectrum disorder in children through integrated bioinformatics analysis
著者:: Somayeh Reiisi, 等
出版事項: (2024-05-01)
著者:: Somayeh Reiisi, 等
出版事項: (2024-05-01)
Construction of a Novel circRNA/miRNA/mRNA Regulatory Network to Explore the Potential Pathogenesis of Wilson’s Disease
著者:: Taohua Wei, 等
出版事項: (2022-06-01)
著者:: Taohua Wei, 等
出版事項: (2022-06-01)
Differential expression profiles and functional prediction of circRNA in mice with traumatic heterotopic ossification
著者:: Zheng Wang, 等
出版事項: (2023-01-01)
著者:: Zheng Wang, 等
出版事項: (2023-01-01)
A CircRNA–miRNA–mRNA Network for Exploring Doxorubicin- and Myocet-Induced Cardiotoxicity in a Translational Porcine Model
著者:: Julia Mester-Tonczar, 等
出版事項: (2023-11-01)
著者:: Julia Mester-Tonczar, 等
出版事項: (2023-11-01)
Analysis of circRNA and miRNA expression profiles in IGF3-induced ovarian maturation in spotted scat (Scatophagus argus)
著者:: Zhiyuan Li, 等
出版事項: (2022-11-01)
著者:: Zhiyuan Li, 等
出版事項: (2022-11-01)
Photoperiods induced the circRNA differential expression in the thyroid gland of OVX+E2 ewes
著者:: Wei Wang, 等
出版事項: (2022-08-01)
著者:: Wei Wang, 等
出版事項: (2022-08-01)
Patterns of Differentially Expressed circRNAs in Human Thymocytes
著者:: Pilar López-Nieva, 等
出版事項: (2022-03-01)
著者:: Pilar López-Nieva, 等
出版事項: (2022-03-01)
circRNA-miRNA-mRNA Deregulated Network in Ischemic Heart Failure Patients
著者:: Alisia Madè, 等
出版事項: (2023-11-01)
著者:: Alisia Madè, 等
出版事項: (2023-11-01)
CircRNAs: versatile players and new targets in organ fibrosis
著者:: Lei Wei, 等
出版事項: (2023-05-01)
著者:: Lei Wei, 等
出版事項: (2023-05-01)
類似資料
-
Crosstalk Among circRNA/lncRNA, miRNA, and mRNA in Osteoarthritis
著者:: Hui Kong, 等
出版事項: (2021-12-01) -
Comprehensive analysis of the circRNA expression profile and circRNA-miRNA-mRNA network in pelvic organ prolapse
著者:: Qian Wang, 等
出版事項: (2025-01-01) -
BJLD-CMI: a predictive circRNA-miRNA interactions model combining multi-angle feature information
著者:: Yi-Xin Zhao, 等
出版事項: (2024-05-01) -
GCNCMI: A Graph Convolutional Neural Network Approach for Predicting circRNA-miRNA Interactions
著者:: Jie He, 等
出版事項: (2022-08-01) -
Identification of potentially functional circRNAs and prediction of the circRNA-miRNA-hub gene network in mice with primary blast lung injury
著者:: Qianying Lu, 等
出版事項: (2023-10-01)
