Management Methods and Duration Induces Changes in Soil Microbial Communities of Carya cathayensis var. dabeishansis Forests

ABSTRACT Soil microbial communities are involved in and contribute to several processes in soil ecosystems. Nonetheless, how various forest management approaches and their timeframes influence soil microbial community composition and network complexity is poorly understood. Hence, in this study, a t...

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Published in:Ecology and Evolution
Main Authors: Cheng Huang, Hua Liu, Shu‐Yi‐Dan Zhou, Linyun Mou, Lingjun Cui, Lan Yao, Yuhua Ma, Fasih Ullah Haider, Songling Fu, Xu Li
Format: Article
Language:English
Published: Wiley 2025-09-01
Subjects:
Online Access:https://doi.org/10.1002/ece3.72173
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author Cheng Huang
Hua Liu
Shu‐Yi‐Dan Zhou
Linyun Mou
Lingjun Cui
Lan Yao
Yuhua Ma
Fasih Ullah Haider
Songling Fu
Xu Li
author_facet Cheng Huang
Hua Liu
Shu‐Yi‐Dan Zhou
Linyun Mou
Lingjun Cui
Lan Yao
Yuhua Ma
Fasih Ullah Haider
Songling Fu
Xu Li
author_sort Cheng Huang
collection DOAJ
container_title Ecology and Evolution
description ABSTRACT Soil microbial communities are involved in and contribute to several processes in soil ecosystems. Nonetheless, how various forest management approaches and their timeframes influence soil microbial community composition and network complexity is poorly understood. Hence, in this study, a time‐series method examined how microbial populations in the soil of Carya cathayensis var. dabeishansis forests varied across different management practices (no management, extensive management, and intensive management) and over periods of 0, 3, 8, 15, and 20 years. High‐throughput sequencing determined the species composition of soil microbial communities, co‐occurrence network analysis assessed interrelationships between communities, and null model theory elucidated deterministic and stochastic processes governing community assembly. The results indicated that under both treatment methods, soil bacterial diversity indices increased compared to the control during short‐term management (3 years), but subsequently declined with further prolonged management duration. Moreover, soil acid phosphatase activity and total potassium levels primarily shaped the bacterial species in the soil, with Acidobacteriota (21.96%–31.45%), Proteobacteria (22.82%–31.12%), Actinobacteria (6.81%–13.05%), and Chloroflexi (6.68%–9.67%) representing the most prevalent bacterial taxa. Interactions between soil bacterial and fungal communities were predominantly cooperative across both management strategies (79.88%–100%). However, the degree of cooperation fluctuated throughout the duration. Stochastic processes, particularly diffusion limitation, played a key role in shaping the assembly of these microbial communities. The diffusion limitation of soil microorganisms was smaller in extensively managed forests than in intensively managed forests. These results highlight the need for balanced forest management strategies, where short‐term intensive practices could help preserve soil microbial diversity and sustain ecosystem functions. Therefore, we strongly recommend adopting an intermittent forest management approach, particularly in intensively managed forests, where it is necessary to allow the ecosystem adequate time for autonomous recovery.
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spelling doaj-art-e118489f72e24b0ca269db23b8bb0dfa2025-10-09T23:41:23ZengWileyEcology and Evolution2045-77582025-09-01159n/an/a10.1002/ece3.72173Management Methods and Duration Induces Changes in Soil Microbial Communities of Carya cathayensis var. dabeishansis ForestsCheng Huang0Hua Liu1Shu‐Yi‐Dan Zhou2Linyun Mou3Lingjun Cui4Lan Yao5Yuhua Ma6Fasih Ullah Haider7Songling Fu8Xu Li9Hubei Key Laboratory of Biologic Resources Protection and Utilization Hubei Minzu University Enshi ChinaAnhui Provincial Key Laboratory of Forest Resources and Silviculture Anhui Agricultural University Hefei ChinaNational Ecological Science Data Center Guangdong Branch, South China Botanical Garden, Chinese Academy of Sciences Guangzhou ChinaHubei Key Laboratory of Biologic Resources Protection and Utilization Hubei Minzu University Enshi ChinaHubei Key Laboratory of Biologic Resources Protection and Utilization Hubei Minzu University Enshi ChinaHubei Key Laboratory of Biologic Resources Protection and Utilization Hubei Minzu University Enshi ChinaCollege of Civil and Architecture Engineering Chuzhou University Chuzhou ChinaNational Ecological Science Data Center Guangdong Branch, South China Botanical Garden, Chinese Academy of Sciences Guangzhou ChinaAnhui Provincial Key Laboratory of Forest Resources and Silviculture Anhui Agricultural University Hefei ChinaNational Ecological Science Data Center Guangdong Branch, South China Botanical Garden, Chinese Academy of Sciences Guangzhou ChinaABSTRACT Soil microbial communities are involved in and contribute to several processes in soil ecosystems. Nonetheless, how various forest management approaches and their timeframes influence soil microbial community composition and network complexity is poorly understood. Hence, in this study, a time‐series method examined how microbial populations in the soil of Carya cathayensis var. dabeishansis forests varied across different management practices (no management, extensive management, and intensive management) and over periods of 0, 3, 8, 15, and 20 years. High‐throughput sequencing determined the species composition of soil microbial communities, co‐occurrence network analysis assessed interrelationships between communities, and null model theory elucidated deterministic and stochastic processes governing community assembly. The results indicated that under both treatment methods, soil bacterial diversity indices increased compared to the control during short‐term management (3 years), but subsequently declined with further prolonged management duration. Moreover, soil acid phosphatase activity and total potassium levels primarily shaped the bacterial species in the soil, with Acidobacteriota (21.96%–31.45%), Proteobacteria (22.82%–31.12%), Actinobacteria (6.81%–13.05%), and Chloroflexi (6.68%–9.67%) representing the most prevalent bacterial taxa. Interactions between soil bacterial and fungal communities were predominantly cooperative across both management strategies (79.88%–100%). However, the degree of cooperation fluctuated throughout the duration. Stochastic processes, particularly diffusion limitation, played a key role in shaping the assembly of these microbial communities. The diffusion limitation of soil microorganisms was smaller in extensively managed forests than in intensively managed forests. These results highlight the need for balanced forest management strategies, where short‐term intensive practices could help preserve soil microbial diversity and sustain ecosystem functions. Therefore, we strongly recommend adopting an intermittent forest management approach, particularly in intensively managed forests, where it is necessary to allow the ecosystem adequate time for autonomous recovery.https://doi.org/10.1002/ece3.72173Carya cathayensis var. dabeishansisforest managementland degradationmicrobial community assemblymicrobial co‐occurrence network
spellingShingle Cheng Huang
Hua Liu
Shu‐Yi‐Dan Zhou
Linyun Mou
Lingjun Cui
Lan Yao
Yuhua Ma
Fasih Ullah Haider
Songling Fu
Xu Li
Management Methods and Duration Induces Changes in Soil Microbial Communities of Carya cathayensis var. dabeishansis Forests
Carya cathayensis var. dabeishansis
forest management
land degradation
microbial community assembly
microbial co‐occurrence network
title Management Methods and Duration Induces Changes in Soil Microbial Communities of Carya cathayensis var. dabeishansis Forests
title_full Management Methods and Duration Induces Changes in Soil Microbial Communities of Carya cathayensis var. dabeishansis Forests
title_fullStr Management Methods and Duration Induces Changes in Soil Microbial Communities of Carya cathayensis var. dabeishansis Forests
title_full_unstemmed Management Methods and Duration Induces Changes in Soil Microbial Communities of Carya cathayensis var. dabeishansis Forests
title_short Management Methods and Duration Induces Changes in Soil Microbial Communities of Carya cathayensis var. dabeishansis Forests
title_sort management methods and duration induces changes in soil microbial communities of carya cathayensis var dabeishansis forests
topic Carya cathayensis var. dabeishansis
forest management
land degradation
microbial community assembly
microbial co‐occurrence network
url https://doi.org/10.1002/ece3.72173
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