Molecular Characterization of Emerging and Uncommon Enteroviruses C104, C105, and C109 in Respiratory Samples from Maryland, USA, 2018–2024

<b>Background</b>: While enteroviruses (EVs) are recognized causes of diverse illnesses, little is known about the epidemiology and molecular characteristics of uncommon enterovirus C (EV-C) types, including EV-C104, EV-C105, and EV-C109. <b>Methods</b>: We conducted genomic...

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التفاصيل البيبلوغرافية
الحاوية / القاعدة:Viruses
المؤلفون الرئيسيون: Amary Fall, Ting X. Zhuang, Alaina Dodge, Omar Abdullah, Julie M. Norton, David Villafuerte, Andrew Pekosz, Eili Klein, Heba H. Mostafa
التنسيق: مقال
اللغة:الإنجليزية
منشور في: MDPI AG 2025-08-01
الموضوعات:
الوصول للمادة أونلاين:https://www.mdpi.com/1999-4915/17/9/1183
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author Amary Fall
Ting X. Zhuang
Alaina Dodge
Omar Abdullah
Julie M. Norton
David Villafuerte
Andrew Pekosz
Eili Klein
Heba H. Mostafa
author_facet Amary Fall
Ting X. Zhuang
Alaina Dodge
Omar Abdullah
Julie M. Norton
David Villafuerte
Andrew Pekosz
Eili Klein
Heba H. Mostafa
author_sort Amary Fall
collection DOAJ
container_title Viruses
description <b>Background</b>: While enteroviruses (EVs) are recognized causes of diverse illnesses, little is known about the epidemiology and molecular characteristics of uncommon enterovirus C (EV-C) types, including EV-C104, EV-C105, and EV-C109. <b>Methods</b>: We conducted genomic surveillance of EVs at the Johns Hopkins Health System between 2018 and 2024 (a total of 3715 samples), identifying EV-C104, EV-C105, and EV-C109 in respiratory samples. VP4-VP2 and whole-genome sequencing were used to assess genetic diversity and intra-host evolution. <b>Results</b>: Five EV-C105 infections were identified primarily in pediatric patients, presenting with a range of clinical features including fever, gastrointestinal symptoms, and cerebellitis. Prolonged EV-C104 and EV-C109 infections were identified in two immunocompromised adults. EV-C104 persisted for over five months and showed evidence of viral genomic changes (intra-host evolution). EV-C109 was detected over a four-month period. Phylogenetic analysis revealed a novel EV-C105 clade (C3) closely related to recent USA strains. EV-C104 genomes aligned with genotype B sequences from the USA and Europe, while EV-C109 sequences were similar to 2014–2015 strains from the Netherlands. <b>Conclusions</b>: These findings highlight the emergence, persistence, and genetic evolution of uncommon EV-C types in Maryland, especially among immunocompromised hosts, emphasizing the importance of continued genomic surveillance and clinical correlations.
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spelling doaj-art-e210bce2dcd2467d92ac8148f178c24e2025-09-26T15:21:49ZengMDPI AGViruses1999-49152025-08-01179118310.3390/v17091183Molecular Characterization of Emerging and Uncommon Enteroviruses C104, C105, and C109 in Respiratory Samples from Maryland, USA, 2018–2024Amary Fall0Ting X. Zhuang1Alaina Dodge2Omar Abdullah3Julie M. Norton4David Villafuerte5Andrew Pekosz6Eili Klein7Heba H. Mostafa8Johns Hopkins School of Medicine, Department of Pathology, Division of Medical Microbiology, Meyer B-121, 600 N. Wolfe St., Baltimore, MD 21287, USAJohns Hopkins School of Medicine, Department of Pathology, Division of Medical Microbiology, Meyer B-121, 600 N. Wolfe St., Baltimore, MD 21287, USAJohns Hopkins School of Medicine, Department of Pathology, Division of Medical Microbiology, Meyer B-121, 600 N. Wolfe St., Baltimore, MD 21287, USAJohns Hopkins School of Medicine, Department of Pathology, Division of Medical Microbiology, Meyer B-121, 600 N. Wolfe St., Baltimore, MD 21287, USAJohns Hopkins School of Medicine, Department of Pathology, Division of Medical Microbiology, Meyer B-121, 600 N. Wolfe St., Baltimore, MD 21287, USAJohns Hopkins School of Medicine, Department of Pathology, Division of Medical Microbiology, Meyer B-121, 600 N. Wolfe St., Baltimore, MD 21287, USAW. Harry Feinstone Department of Molecular Microbiology and Immunology, The Johns Hopkins Bloomberg School of Public Health, Baltimore, MD 21287, USADepartment of Emergency Medicine, Johns Hopkins School of Medicine, Baltimore, MD 21287, USAJohns Hopkins School of Medicine, Department of Pathology, Division of Medical Microbiology, Meyer B-121, 600 N. Wolfe St., Baltimore, MD 21287, USA<b>Background</b>: While enteroviruses (EVs) are recognized causes of diverse illnesses, little is known about the epidemiology and molecular characteristics of uncommon enterovirus C (EV-C) types, including EV-C104, EV-C105, and EV-C109. <b>Methods</b>: We conducted genomic surveillance of EVs at the Johns Hopkins Health System between 2018 and 2024 (a total of 3715 samples), identifying EV-C104, EV-C105, and EV-C109 in respiratory samples. VP4-VP2 and whole-genome sequencing were used to assess genetic diversity and intra-host evolution. <b>Results</b>: Five EV-C105 infections were identified primarily in pediatric patients, presenting with a range of clinical features including fever, gastrointestinal symptoms, and cerebellitis. Prolonged EV-C104 and EV-C109 infections were identified in two immunocompromised adults. EV-C104 persisted for over five months and showed evidence of viral genomic changes (intra-host evolution). EV-C109 was detected over a four-month period. Phylogenetic analysis revealed a novel EV-C105 clade (C3) closely related to recent USA strains. EV-C104 genomes aligned with genotype B sequences from the USA and Europe, while EV-C109 sequences were similar to 2014–2015 strains from the Netherlands. <b>Conclusions</b>: These findings highlight the emergence, persistence, and genetic evolution of uncommon EV-C types in Maryland, especially among immunocompromised hosts, emphasizing the importance of continued genomic surveillance and clinical correlations.https://www.mdpi.com/1999-4915/17/9/1183enterovirus CEV-C105EV-C104EV-C109whole-genome sequencingimmunocompromised host
spellingShingle Amary Fall
Ting X. Zhuang
Alaina Dodge
Omar Abdullah
Julie M. Norton
David Villafuerte
Andrew Pekosz
Eili Klein
Heba H. Mostafa
Molecular Characterization of Emerging and Uncommon Enteroviruses C104, C105, and C109 in Respiratory Samples from Maryland, USA, 2018–2024
enterovirus C
EV-C105
EV-C104
EV-C109
whole-genome sequencing
immunocompromised host
title Molecular Characterization of Emerging and Uncommon Enteroviruses C104, C105, and C109 in Respiratory Samples from Maryland, USA, 2018–2024
title_full Molecular Characterization of Emerging and Uncommon Enteroviruses C104, C105, and C109 in Respiratory Samples from Maryland, USA, 2018–2024
title_fullStr Molecular Characterization of Emerging and Uncommon Enteroviruses C104, C105, and C109 in Respiratory Samples from Maryland, USA, 2018–2024
title_full_unstemmed Molecular Characterization of Emerging and Uncommon Enteroviruses C104, C105, and C109 in Respiratory Samples from Maryland, USA, 2018–2024
title_short Molecular Characterization of Emerging and Uncommon Enteroviruses C104, C105, and C109 in Respiratory Samples from Maryland, USA, 2018–2024
title_sort molecular characterization of emerging and uncommon enteroviruses c104 c105 and c109 in respiratory samples from maryland usa 2018 2024
topic enterovirus C
EV-C105
EV-C104
EV-C109
whole-genome sequencing
immunocompromised host
url https://www.mdpi.com/1999-4915/17/9/1183
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