The complete chloroplast genome sequence of Michelia wilsonii: an endangered species in China
The first complete chloroplast genome (cpDNA) sequence of Michelia wilsonii was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,100 bp in length, contains a large single-copy region (LSC) of 88,162 bp and a small single-copy region (SSC) of 18,786 bp, which we...
| Published in: | Mitochondrial DNA. Part B. Resources |
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| Main Authors: | , , , |
| Format: | Article |
| Language: | English |
| Published: |
Taylor & Francis Group
2020-01-01
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| Subjects: | |
| Online Access: | http://dx.doi.org/10.1080/23802359.2020.1721354 |
| _version_ | 1850080433245519872 |
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| author | Yongkang Sima Yunqing Li Xiaolong Yuan Yi Wang |
| author_facet | Yongkang Sima Yunqing Li Xiaolong Yuan Yi Wang |
| author_sort | Yongkang Sima |
| collection | DOAJ |
| container_title | Mitochondrial DNA. Part B. Resources |
| description | The first complete chloroplast genome (cpDNA) sequence of Michelia wilsonii was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,100 bp in length, contains a large single-copy region (LSC) of 88,162 bp and a small single-copy region (SSC) of 18,786 bp, which were separated by a pair of inverted repeats (IR) regions of 26,576 bp. The genome contains 132 genes, including 87 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. Further phylogenomic analysis showed that M. wilsonii closed to Michelia odora and Michelia yunnanensis in Michelieae tribe of the Magnoliaceae family. |
| format | Article |
| id | doaj-art-e3993dd328364ca8a3159dd705c962ea |
| institution | Directory of Open Access Journals |
| issn | 2380-2359 |
| language | English |
| publishDate | 2020-01-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| spelling | doaj-art-e3993dd328364ca8a3159dd705c962ea2025-08-20T00:13:17ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592020-01-01511038103910.1080/23802359.2020.17213541721354The complete chloroplast genome sequence of Michelia wilsonii: an endangered species in ChinaYongkang Sima0Yunqing Li1Xiaolong Yuan2Yi Wang3Laboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry and The Key Laboratory of Rare and Endangered Forest Plants of State Forestry AdministrationLaboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry and The Key Laboratory of Rare and Endangered Forest Plants of State Forestry AdministrationLaboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry and The Key Laboratory of Rare and Endangered Forest Plants of State Forestry AdministrationLaboratory of Forest Plant Cultivation and Utilization, Yunnan Academy of Forestry and The Key Laboratory of Rare and Endangered Forest Plants of State Forestry AdministrationThe first complete chloroplast genome (cpDNA) sequence of Michelia wilsonii was determined from Illumina HiSeq pair-end sequencing data in this study. The cpDNA is 160,100 bp in length, contains a large single-copy region (LSC) of 88,162 bp and a small single-copy region (SSC) of 18,786 bp, which were separated by a pair of inverted repeats (IR) regions of 26,576 bp. The genome contains 132 genes, including 87 protein-coding genes, 8 ribosomal RNA genes, and 37 transfer RNA genes. Further phylogenomic analysis showed that M. wilsonii closed to Michelia odora and Michelia yunnanensis in Michelieae tribe of the Magnoliaceae family.http://dx.doi.org/10.1080/23802359.2020.1721354michelia wilsoniichloroplastillumina sequencingphylogenetic analysis |
| spellingShingle | Yongkang Sima Yunqing Li Xiaolong Yuan Yi Wang The complete chloroplast genome sequence of Michelia wilsonii: an endangered species in China michelia wilsonii chloroplast illumina sequencing phylogenetic analysis |
| title | The complete chloroplast genome sequence of Michelia wilsonii: an endangered species in China |
| title_full | The complete chloroplast genome sequence of Michelia wilsonii: an endangered species in China |
| title_fullStr | The complete chloroplast genome sequence of Michelia wilsonii: an endangered species in China |
| title_full_unstemmed | The complete chloroplast genome sequence of Michelia wilsonii: an endangered species in China |
| title_short | The complete chloroplast genome sequence of Michelia wilsonii: an endangered species in China |
| title_sort | complete chloroplast genome sequence of michelia wilsonii an endangered species in china |
| topic | michelia wilsonii chloroplast illumina sequencing phylogenetic analysis |
| url | http://dx.doi.org/10.1080/23802359.2020.1721354 |
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