The immune factors have complex causal regulation effects on kidney stone disease: a mendelian randomization study
Abstract Purpose Previous studies have reported the potential impact of immune cells on kidney stone disease (KSD), but definitive causal relationships have yet to be established. The purpose of this paper is to elucidate the potential causal association between immune cells and KSD by Mendelian ran...
| Published in: | BMC Immunology |
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| Main Authors: | , , , , , , , , |
| Format: | Article |
| Language: | English |
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BMC
2024-06-01
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| Online Access: | https://doi.org/10.1186/s12865-024-00627-x |
| _version_ | 1850368558664515584 |
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| author | Dongfeng Yuan Junyi Yang Weisong Wu Yirixiatijiang Amier Xianmiu Li Wenlong Wan Yisheng Huang Jiabo Li Xiao Yu |
| author_facet | Dongfeng Yuan Junyi Yang Weisong Wu Yirixiatijiang Amier Xianmiu Li Wenlong Wan Yisheng Huang Jiabo Li Xiao Yu |
| author_sort | Dongfeng Yuan |
| collection | DOAJ |
| container_title | BMC Immunology |
| description | Abstract Purpose Previous studies have reported the potential impact of immune cells on kidney stone disease (KSD), but definitive causal relationships have yet to be established. The purpose of this paper is to elucidate the potential causal association between immune cells and KSD by Mendelian randomization (MR) analysis. Methods In our study, a thorough two-sample Mendelian randomization (MR) analysis was performed by us to determine the potential causal relationship between immune cell traits and kidney stone disease. We included a total of four immune traits (median fluorescence intensity (MFI), relative cellular (RC), absolute cellular (AC), and morphological parameters (MP)), which are publicly available data. GWAS summary data related to KSD (9713 cases and 366,693 controls) were obtained from the FinnGen consortium. The primary MR analysis method was Inverse variance weighted. Cochran’s Q test, MR Egger, and MR-Pleiotropy RESidual Sum and Outlier (MR-PRESSO) were used to assess the stability of the results. Results After FDR correction, the CD8 on HLA DR + CD8br (OR = 0.95, 95% CI = 0.93–0.98, p-value = 7.20 × 10− 4, q-value = 0.088) was determined to be distinctly associated with KSD, and we also found other 25 suggestive associations between immune cells and KSD, of which 13 associations were suggested as protective factors and 12 associations were suggested as risk factors. There was no horizontal pleiotropy or significant heterogeneity in our MR analysis, as determined by the p-value results of our Cochrane Q-test, MR Egger’s intercept test, and MR-PRESSO, which were all > 0.05. Conclusions Our study has explored the potential causal connection between immune cells and KSD by Mendelian randomization analysis, thus providing some insights for future clinical studies. |
| format | Article |
| id | doaj-art-e512e21cc4f54f999634cabe1d8a5a9a |
| institution | Directory of Open Access Journals |
| issn | 1471-2172 |
| language | English |
| publishDate | 2024-06-01 |
| publisher | BMC |
| record_format | Article |
| spelling | doaj-art-e512e21cc4f54f999634cabe1d8a5a9a2025-08-19T23:02:27ZengBMCBMC Immunology1471-21722024-06-0125111010.1186/s12865-024-00627-xThe immune factors have complex causal regulation effects on kidney stone disease: a mendelian randomization studyDongfeng Yuan0Junyi Yang1Weisong Wu2Yirixiatijiang Amier3Xianmiu Li4Wenlong Wan5Yisheng Huang6Jiabo Li7Xiao Yu8Department of Urology, Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and TechnologyDepartment of Urology, Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and TechnologyDepartment of Urology, Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and TechnologyDepartment of Urology, Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and TechnologyDepartment of Urology, Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and TechnologyDepartment of Urology, Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and TechnologyDepartment of Urology, Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and TechnologyDepartment of Urology, Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and TechnologyDepartment of Urology, Institute of Urology, Tongji Hospital, Tongji Medical College, Huazhong University of Science and TechnologyAbstract Purpose Previous studies have reported the potential impact of immune cells on kidney stone disease (KSD), but definitive causal relationships have yet to be established. The purpose of this paper is to elucidate the potential causal association between immune cells and KSD by Mendelian randomization (MR) analysis. Methods In our study, a thorough two-sample Mendelian randomization (MR) analysis was performed by us to determine the potential causal relationship between immune cell traits and kidney stone disease. We included a total of four immune traits (median fluorescence intensity (MFI), relative cellular (RC), absolute cellular (AC), and morphological parameters (MP)), which are publicly available data. GWAS summary data related to KSD (9713 cases and 366,693 controls) were obtained from the FinnGen consortium. The primary MR analysis method was Inverse variance weighted. Cochran’s Q test, MR Egger, and MR-Pleiotropy RESidual Sum and Outlier (MR-PRESSO) were used to assess the stability of the results. Results After FDR correction, the CD8 on HLA DR + CD8br (OR = 0.95, 95% CI = 0.93–0.98, p-value = 7.20 × 10− 4, q-value = 0.088) was determined to be distinctly associated with KSD, and we also found other 25 suggestive associations between immune cells and KSD, of which 13 associations were suggested as protective factors and 12 associations were suggested as risk factors. There was no horizontal pleiotropy or significant heterogeneity in our MR analysis, as determined by the p-value results of our Cochrane Q-test, MR Egger’s intercept test, and MR-PRESSO, which were all > 0.05. Conclusions Our study has explored the potential causal connection between immune cells and KSD by Mendelian randomization analysis, thus providing some insights for future clinical studies.https://doi.org/10.1186/s12865-024-00627-xImmune cellKidney stone diseaseCausal relationshipMendelian randomizationGWAS |
| spellingShingle | Dongfeng Yuan Junyi Yang Weisong Wu Yirixiatijiang Amier Xianmiu Li Wenlong Wan Yisheng Huang Jiabo Li Xiao Yu The immune factors have complex causal regulation effects on kidney stone disease: a mendelian randomization study Immune cell Kidney stone disease Causal relationship Mendelian randomization GWAS |
| title | The immune factors have complex causal regulation effects on kidney stone disease: a mendelian randomization study |
| title_full | The immune factors have complex causal regulation effects on kidney stone disease: a mendelian randomization study |
| title_fullStr | The immune factors have complex causal regulation effects on kidney stone disease: a mendelian randomization study |
| title_full_unstemmed | The immune factors have complex causal regulation effects on kidney stone disease: a mendelian randomization study |
| title_short | The immune factors have complex causal regulation effects on kidney stone disease: a mendelian randomization study |
| title_sort | immune factors have complex causal regulation effects on kidney stone disease a mendelian randomization study |
| topic | Immune cell Kidney stone disease Causal relationship Mendelian randomization GWAS |
| url | https://doi.org/10.1186/s12865-024-00627-x |
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