<i>Streptomyces lydicamycinicus</i> sp. nov. and Its Secondary Metabolite Biosynthetic Gene Clusters for Polyketide and Nonribosomal Peptide Compounds
(1) Background: <i>Streptomyces</i> sp. TP-A0598 derived from seawater produces lydicamycin and its congeners. We aimed to investigate its taxonomic status; (2) Methods: A polyphasic approach and whole genome analysis are employed; (3) Results: Strain TP-A0598 contained <span style=&q...
| Published in: | Microorganisms |
|---|---|
| Main Authors: | Hisayuki Komaki, Akira Hosoyama, Yasuhiro Igarashi, Tomohiko Tamura |
| Format: | Article |
| Language: | English |
| Published: |
MDPI AG
2020-03-01
|
| Subjects: | |
| Online Access: | https://www.mdpi.com/2076-2607/8/3/370 |
Similar Items
Polyketide Synthase and Nonribosomal Peptide Synthetase Gene Clusters in Type Strains of the Genus <i>Phytohabitans</i>
by: Hisayuki Komaki, et al.
Published: (2020-10-01)
by: Hisayuki Komaki, et al.
Published: (2020-10-01)
Taxonomic Positions of a Nyuzenamide-Producer and Its Closely Related Strains
by: Hisayuki Komaki, et al.
Published: (2022-02-01)
by: Hisayuki Komaki, et al.
Published: (2022-02-01)
Profile of PKS and NRPS Gene Clusters in the Genome of <i>Streptomyces cellostaticus</i> NBRC 12849<sup>T</sup>
by: Hisayuki Komaki, et al.
Published: (2023-10-01)
by: Hisayuki Komaki, et al.
Published: (2023-10-01)
Biosynthetic origin of butyrolactol A, an antifungal polyketide produced by a marine-derived Streptomyces
by: Enjuro Harunari, et al.
Published: (2017-03-01)
by: Enjuro Harunari, et al.
Published: (2017-03-01)
Epoxinnamide: An Epoxy Cinnamoyl-Containing Nonribosomal Peptide from an Intertidal Mudflat-Derived <i>Streptomyces</i> sp.
by: Sangwook Kang, et al.
Published: (2022-07-01)
by: Sangwook Kang, et al.
Published: (2022-07-01)
Insights into Streptomyces spp. isolated from the rhizospheric soil of Panax notoginseng: isolation, antimicrobial activity and biosynthetic potential for polyketides and non-ribosomal peptides
by: Fei Peng, et al.
Published: (2020-06-01)
by: Fei Peng, et al.
Published: (2020-06-01)
Classification and Secondary Metabolite-Biosynthetic Gene Clusters of Marine <i>Streptomyces</i> Strains Including a Lobophorin- and Divergolide-Producer
by: Hisayuki Komaki, et al.
Published: (2023-02-01)
by: Hisayuki Komaki, et al.
Published: (2023-02-01)
Taeanamides A and B, Nonribosomal Lipo-Decapeptides Isolated from an Intertidal-Mudflat-Derived <i>Streptomyces</i> sp.
by: Jinsheng Cui, et al.
Published: (2022-06-01)
by: Jinsheng Cui, et al.
Published: (2022-06-01)
Mining biosynthetic gene clusters in Virgibacillus genomes
by: Ghofran Othoum, et al.
Published: (2019-09-01)
by: Ghofran Othoum, et al.
Published: (2019-09-01)
Discovery of Acyl-Surugamide A2 from Marine <i>Streptomyces albidoflavus</i> RKJM-0023—A New Cyclic Nonribosomal Peptide Containing an N-ε-acetyl-L-lysine Residue
by: Zacharie A. Maw, et al.
Published: (2024-03-01)
by: Zacharie A. Maw, et al.
Published: (2024-03-01)
<i>Streptomyces hygroscopicus</i> and <i>rapamycinicus</i> Evaluated from a U.S. Marine Sanctuary: Biosynthetic Gene Clusters Encode Antibiotic and Chemotherapeutic Secondary Metabolites
by: Hannah R. Flaherty, et al.
Published: (2024-11-01)
by: Hannah R. Flaherty, et al.
Published: (2024-11-01)
Insights into the Variation in Bioactivities of Closely Related <i>Streptomyces</i> Strains from Marine Sediments of the Visayan Sea against ESKAPE and Ovarian Cancer
by: Edna M. Sabido, et al.
Published: (2021-07-01)
by: Edna M. Sabido, et al.
Published: (2021-07-01)
Rationally Improving Doramectin Production in Industrial <i>Streptomyces avermitilis</i> Strains
by: Fujun Dang, et al.
Published: (2023-06-01)
by: Fujun Dang, et al.
Published: (2023-06-01)
A Genomic Survey of the Natural Product Biosynthetic Potential of Actinomycetes Isolated from New Zealand Lichens
by: Peng Hou, et al.
Published: (2023-04-01)
by: Peng Hou, et al.
Published: (2023-04-01)
Nerpa: A Tool for Discovering Biosynthetic Gene Clusters of Bacterial Nonribosomal Peptides
by: Olga Kunyavskaya, et al.
Published: (2021-10-01)
by: Olga Kunyavskaya, et al.
Published: (2021-10-01)
Draft genome sequence of Streptomyces hyaluromycini MB-PO13T, a hyaluromycin producer
by: Enjuro Harunari, et al.
Published: (2018-01-01)
by: Enjuro Harunari, et al.
Published: (2018-01-01)
Induction of New Aromatic Polyketides from the Marine Actinobacterium <i>Streptomyces griseorubiginosus</i> through an OSMAC Approach
by: Víctor Rodríguez Martín-Aragón, et al.
Published: (2023-10-01)
by: Víctor Rodríguez Martín-Aragón, et al.
Published: (2023-10-01)
Microbial Communities of <i>Cladonia</i> Lichens and Their Biosynthetic Gene Clusters Potentially Encoding Natural Products
by: Tânia Keiko Shishido, et al.
Published: (2021-06-01)
by: Tânia Keiko Shishido, et al.
Published: (2021-06-01)
Metabolomic Analysis Demonstrates the Impacts of Polyketide Synthases PKS14 and PKS15 on the Production of Beauvericins, Bassianolide, Enniatin A, and Ferricrocin in Entomopathogen <i>Beauveria bassiana</i>
by: Wachiraporn Toopaang, et al.
Published: (2023-03-01)
by: Wachiraporn Toopaang, et al.
Published: (2023-03-01)
New Kendomycin Derivative Isolated from <i>Streptomyces</i> sp. Cl 58-27
by: Constanze Paulus, et al.
Published: (2021-11-01)
by: Constanze Paulus, et al.
Published: (2021-11-01)
Secondary Metabolites and Biosynthetic Gene Clusters Analysis of Deep-Sea Hydrothermal Vent-Derived <i>Streptomyces</i> sp. SCSIO ZS0520
by: Huaran Zhang, et al.
Published: (2022-06-01)
by: Huaran Zhang, et al.
Published: (2022-06-01)
Mining the Biosynthetic Potential for Specialized Metabolism of a <i>Streptomyces</i> Soil Community
by: Matthieu Nicault, et al.
Published: (2020-05-01)
by: Matthieu Nicault, et al.
Published: (2020-05-01)
Recent Advances in Strategies for Activation and Discovery/Characterization of Cryptic Biosynthetic Gene Clusters in <i>Streptomyces</i>
by: Chung Thanh Nguyen, et al.
Published: (2020-04-01)
by: Chung Thanh Nguyen, et al.
Published: (2020-04-01)
In Silico Analysis of PKS and NRPS Gene Clusters in Arisostatin- and Kosinostatin-Producers and Description of <i>Micromonospora okii</i> sp. nov.
by: Hisayuki Komaki, et al.
Published: (2021-11-01)
by: Hisayuki Komaki, et al.
Published: (2021-11-01)
Increasing the heterologous production of spinosad in Streptomyces albus J1074 by regulating biosynthesis of its polyketide skeleton
by: Ziheng An, et al.
Published: (2021-12-01)
by: Ziheng An, et al.
Published: (2021-12-01)
Functional Characterization of Polyketide Synthase Clusters in Streptomyces anandii J6
by: Da-Ran Kim, et al.
Published: (2025-08-01)
by: Da-Ran Kim, et al.
Published: (2025-08-01)
Taxonogenomic Analysis of Marine-Derived <i>Streptomyces</i> sp. N11-50 and the Profile of NRPS and PKS Gene Clusters
by: Hisayuki Komaki, et al.
Published: (2023-06-01)
by: Hisayuki Komaki, et al.
Published: (2023-06-01)
Characterization of the Antibacterial Activity of Quinone-Based Compounds Originating from the Alnumycin Biosynthetic Gene Cluster of a <i>Streptomyces</i> Isolate
by: Leonie Sagurna, et al.
Published: (2023-06-01)
by: Leonie Sagurna, et al.
Published: (2023-06-01)
Genetic Relationships in the Toxin-Producing Fungal Endophyte, <i>Alternaria</i> <i>oxytropis</i> Using Polyketide Synthase and Non-Ribosomal Peptide Synthase Genes
by: Rebecca Creamer, et al.
Published: (2021-07-01)
by: Rebecca Creamer, et al.
Published: (2021-07-01)
Identification of the Actinomycin D Biosynthetic Pathway from Marine-Derived <i>Streptomyces costaricanus</i> SCSIO ZS0073
by: Mengchan Liu, et al.
Published: (2019-04-01)
by: Mengchan Liu, et al.
Published: (2019-04-01)
Comparative Genomic Insights into Secondary Metabolism Biosynthetic Gene Cluster Distributions of Marine <i>Streptomyces</i>
by: Lin Xu, et al.
Published: (2019-08-01)
by: Lin Xu, et al.
Published: (2019-08-01)
Small Spatial Scale Drivers of Secondary Metabolite Biosynthetic Diversity in Environmental Microbiomes
by: Aileen Ute Geers, et al.
Published: (2023-04-01)
by: Aileen Ute Geers, et al.
Published: (2023-04-01)
A Multidisciplinary Approach to Unraveling the Natural Product Biosynthetic Potential of a <i>Streptomyces</i> Strain Collection Isolated from Leaf-Cutting Ants
by: Ana Ceniceros, et al.
Published: (2021-10-01)
by: Ana Ceniceros, et al.
Published: (2021-10-01)
Phaeochromycins F–H, three new polyketide metabolites from Streptomyces sp. DSS-18
by: Jian Li, et al.
Published: (2008-12-01)
by: Jian Li, et al.
Published: (2008-12-01)
Biologically Active Nonribosomal Peptides. III. Mechanism of Biosynthesis of Nonribosomal Peptides
by: T. I. Orlova, et al.
Published: (2020-05-01)
by: T. I. Orlova, et al.
Published: (2020-05-01)
Recent Progress of Reclassification of the Genus <i>Streptomyces</i>
by: Hisayuki Komaki
Published: (2023-03-01)
by: Hisayuki Komaki
Published: (2023-03-01)
Rational Design of Polyketide Natural Products
by: Enej Kuščer, et al.
Published: (2005-01-01)
by: Enej Kuščer, et al.
Published: (2005-01-01)
Draft genome sequence data of the endophytic actinobacterium Streptomyces justiciae WPN32, a potential bioactive compounds producer
by: Montri Yasawong, et al.
Published: (2024-02-01)
by: Montri Yasawong, et al.
Published: (2024-02-01)
New Antimicrobial Accramycins from <i>Streptomyces</i> sp. MA37 Variant
by: Aziz Alabed, et al.
Published: (2023-12-01)
by: Aziz Alabed, et al.
Published: (2023-12-01)
Polyketide Derivatives from the Endophytic Fungus <i>Phaeosphaeria</i> sp. LF5 Isolated from <i>Huperzia serrata</i> and Their Acetylcholinesterase Inhibitory Activities
by: Yiwen Xiao, et al.
Published: (2022-02-01)
by: Yiwen Xiao, et al.
Published: (2022-02-01)
Similar Items
-
Polyketide Synthase and Nonribosomal Peptide Synthetase Gene Clusters in Type Strains of the Genus <i>Phytohabitans</i>
by: Hisayuki Komaki, et al.
Published: (2020-10-01) -
Taxonomic Positions of a Nyuzenamide-Producer and Its Closely Related Strains
by: Hisayuki Komaki, et al.
Published: (2022-02-01) -
Profile of PKS and NRPS Gene Clusters in the Genome of <i>Streptomyces cellostaticus</i> NBRC 12849<sup>T</sup>
by: Hisayuki Komaki, et al.
Published: (2023-10-01) -
Biosynthetic origin of butyrolactol A, an antifungal polyketide produced by a marine-derived Streptomyces
by: Enjuro Harunari, et al.
Published: (2017-03-01) -
Epoxinnamide: An Epoxy Cinnamoyl-Containing Nonribosomal Peptide from an Intertidal Mudflat-Derived <i>Streptomyces</i> sp.
by: Sangwook Kang, et al.
Published: (2022-07-01)
