Simulation-based inference for model parameterization on analog neuromorphic hardware

The BrainScaleS-2 (BSS-2) system implements physical models of neurons as well as synapses and aims for an energy-efficient and fast emulation of biological neurons. When replicating neuroscientific experiments on BSS-2, a major challenge is finding suitable model parameters. This study investigates...

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Published in:Neuromorphic Computing and Engineering
Main Authors: Jakob Kaiser, Raphael Stock, Eric Müller, Johannes Schemmel, Sebastian Schmitt
Format: Article
Language:English
Published: IOP Publishing 2023-01-01
Subjects:
Online Access:https://doi.org/10.1088/2634-4386/ad046d
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author Jakob Kaiser
Raphael Stock
Eric Müller
Johannes Schemmel
Sebastian Schmitt
author_facet Jakob Kaiser
Raphael Stock
Eric Müller
Johannes Schemmel
Sebastian Schmitt
author_sort Jakob Kaiser
collection DOAJ
container_title Neuromorphic Computing and Engineering
description The BrainScaleS-2 (BSS-2) system implements physical models of neurons as well as synapses and aims for an energy-efficient and fast emulation of biological neurons. When replicating neuroscientific experiments on BSS-2, a major challenge is finding suitable model parameters. This study investigates the suitability of the sequential neural posterior estimation (SNPE) algorithm for parameterizing a multi-compartmental neuron model emulated on the BSS-2 analog neuromorphic system. The SNPE algorithm belongs to the class of simulation-based inference methods and estimates the posterior distribution of the model parameters; access to the posterior allows quantifying the confidence in parameter estimations and unveiling correlation between model parameters. For our multi-compartmental model, we show that the approximated posterior agrees with experimental observations and that the identified correlation between parameters fits theoretical expectations. Furthermore, as already shown for software simulations, the algorithm can deal with high-dimensional observations and parameter spaces when the data is generated by emulations on BSS-2. These results suggest that the SNPE algorithm is a promising approach for automating the parameterization and the analyzation of complex models, especially when dealing with characteristic properties of analog neuromorphic substrates, such as trial-to-trial variations or limited parameter ranges.
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spelling doaj-art-e8f7452375e947edb7a656d136cf07f22025-08-19T22:12:07ZengIOP PublishingNeuromorphic Computing and Engineering2634-43862023-01-013404400610.1088/2634-4386/ad046dSimulation-based inference for model parameterization on analog neuromorphic hardwareJakob Kaiser0https://orcid.org/0000-0002-3586-2634Raphael Stock1https://orcid.org/0009-0008-5531-1072Eric Müller2https://orcid.org/0000-0001-5880-2012Johannes Schemmel3https://orcid.org/0000-0003-1440-4375Sebastian Schmitt4https://orcid.org/0000-0002-7935-0470Kirchhoff-Institute for Physics (European Institute for Neuromorphic Computing), Heidelberg University , Heidelberg, GermanyKirchhoff-Institute for Physics (European Institute for Neuromorphic Computing), Heidelberg University , Heidelberg, GermanyKirchhoff-Institute for Physics (European Institute for Neuromorphic Computing), Heidelberg University , Heidelberg, GermanyKirchhoff-Institute for Physics (European Institute for Neuromorphic Computing), Heidelberg University , Heidelberg, GermanyDepartment for Neuro- and Sensory Physiology, University Medical Center Göttingen , Göttingen, GermanyThe BrainScaleS-2 (BSS-2) system implements physical models of neurons as well as synapses and aims for an energy-efficient and fast emulation of biological neurons. When replicating neuroscientific experiments on BSS-2, a major challenge is finding suitable model parameters. This study investigates the suitability of the sequential neural posterior estimation (SNPE) algorithm for parameterizing a multi-compartmental neuron model emulated on the BSS-2 analog neuromorphic system. The SNPE algorithm belongs to the class of simulation-based inference methods and estimates the posterior distribution of the model parameters; access to the posterior allows quantifying the confidence in parameter estimations and unveiling correlation between model parameters. For our multi-compartmental model, we show that the approximated posterior agrees with experimental observations and that the identified correlation between parameters fits theoretical expectations. Furthermore, as already shown for software simulations, the algorithm can deal with high-dimensional observations and parameter spaces when the data is generated by emulations on BSS-2. These results suggest that the SNPE algorithm is a promising approach for automating the parameterization and the analyzation of complex models, especially when dealing with characteristic properties of analog neuromorphic substrates, such as trial-to-trial variations or limited parameter ranges.https://doi.org/10.1088/2634-4386/ad046danalogneuromorphicsimulation-based inferencemulti-compartment
spellingShingle Jakob Kaiser
Raphael Stock
Eric Müller
Johannes Schemmel
Sebastian Schmitt
Simulation-based inference for model parameterization on analog neuromorphic hardware
analog
neuromorphic
simulation-based inference
multi-compartment
title Simulation-based inference for model parameterization on analog neuromorphic hardware
title_full Simulation-based inference for model parameterization on analog neuromorphic hardware
title_fullStr Simulation-based inference for model parameterization on analog neuromorphic hardware
title_full_unstemmed Simulation-based inference for model parameterization on analog neuromorphic hardware
title_short Simulation-based inference for model parameterization on analog neuromorphic hardware
title_sort simulation based inference for model parameterization on analog neuromorphic hardware
topic analog
neuromorphic
simulation-based inference
multi-compartment
url https://doi.org/10.1088/2634-4386/ad046d
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AT johannesschemmel simulationbasedinferenceformodelparameterizationonanalogneuromorphichardware
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