Simulation-based inference for model parameterization on analog neuromorphic hardware
The BrainScaleS-2 (BSS-2) system implements physical models of neurons as well as synapses and aims for an energy-efficient and fast emulation of biological neurons. When replicating neuroscientific experiments on BSS-2, a major challenge is finding suitable model parameters. This study investigates...
| Published in: | Neuromorphic Computing and Engineering |
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| Main Authors: | , , , , |
| Format: | Article |
| Language: | English |
| Published: |
IOP Publishing
2023-01-01
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| Subjects: | |
| Online Access: | https://doi.org/10.1088/2634-4386/ad046d |
| _version_ | 1851883972397629440 |
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| author | Jakob Kaiser Raphael Stock Eric Müller Johannes Schemmel Sebastian Schmitt |
| author_facet | Jakob Kaiser Raphael Stock Eric Müller Johannes Schemmel Sebastian Schmitt |
| author_sort | Jakob Kaiser |
| collection | DOAJ |
| container_title | Neuromorphic Computing and Engineering |
| description | The BrainScaleS-2 (BSS-2) system implements physical models of neurons as well as synapses and aims for an energy-efficient and fast emulation of biological neurons. When replicating neuroscientific experiments on BSS-2, a major challenge is finding suitable model parameters. This study investigates the suitability of the sequential neural posterior estimation (SNPE) algorithm for parameterizing a multi-compartmental neuron model emulated on the BSS-2 analog neuromorphic system. The SNPE algorithm belongs to the class of simulation-based inference methods and estimates the posterior distribution of the model parameters; access to the posterior allows quantifying the confidence in parameter estimations and unveiling correlation between model parameters. For our multi-compartmental model, we show that the approximated posterior agrees with experimental observations and that the identified correlation between parameters fits theoretical expectations. Furthermore, as already shown for software simulations, the algorithm can deal with high-dimensional observations and parameter spaces when the data is generated by emulations on BSS-2. These results suggest that the SNPE algorithm is a promising approach for automating the parameterization and the analyzation of complex models, especially when dealing with characteristic properties of analog neuromorphic substrates, such as trial-to-trial variations or limited parameter ranges. |
| format | Article |
| id | doaj-art-e8f7452375e947edb7a656d136cf07f2 |
| institution | Directory of Open Access Journals |
| issn | 2634-4386 |
| language | English |
| publishDate | 2023-01-01 |
| publisher | IOP Publishing |
| record_format | Article |
| spelling | doaj-art-e8f7452375e947edb7a656d136cf07f22025-08-19T22:12:07ZengIOP PublishingNeuromorphic Computing and Engineering2634-43862023-01-013404400610.1088/2634-4386/ad046dSimulation-based inference for model parameterization on analog neuromorphic hardwareJakob Kaiser0https://orcid.org/0000-0002-3586-2634Raphael Stock1https://orcid.org/0009-0008-5531-1072Eric Müller2https://orcid.org/0000-0001-5880-2012Johannes Schemmel3https://orcid.org/0000-0003-1440-4375Sebastian Schmitt4https://orcid.org/0000-0002-7935-0470Kirchhoff-Institute for Physics (European Institute for Neuromorphic Computing), Heidelberg University , Heidelberg, GermanyKirchhoff-Institute for Physics (European Institute for Neuromorphic Computing), Heidelberg University , Heidelberg, GermanyKirchhoff-Institute for Physics (European Institute for Neuromorphic Computing), Heidelberg University , Heidelberg, GermanyKirchhoff-Institute for Physics (European Institute for Neuromorphic Computing), Heidelberg University , Heidelberg, GermanyDepartment for Neuro- and Sensory Physiology, University Medical Center Göttingen , Göttingen, GermanyThe BrainScaleS-2 (BSS-2) system implements physical models of neurons as well as synapses and aims for an energy-efficient and fast emulation of biological neurons. When replicating neuroscientific experiments on BSS-2, a major challenge is finding suitable model parameters. This study investigates the suitability of the sequential neural posterior estimation (SNPE) algorithm for parameterizing a multi-compartmental neuron model emulated on the BSS-2 analog neuromorphic system. The SNPE algorithm belongs to the class of simulation-based inference methods and estimates the posterior distribution of the model parameters; access to the posterior allows quantifying the confidence in parameter estimations and unveiling correlation between model parameters. For our multi-compartmental model, we show that the approximated posterior agrees with experimental observations and that the identified correlation between parameters fits theoretical expectations. Furthermore, as already shown for software simulations, the algorithm can deal with high-dimensional observations and parameter spaces when the data is generated by emulations on BSS-2. These results suggest that the SNPE algorithm is a promising approach for automating the parameterization and the analyzation of complex models, especially when dealing with characteristic properties of analog neuromorphic substrates, such as trial-to-trial variations or limited parameter ranges.https://doi.org/10.1088/2634-4386/ad046danalogneuromorphicsimulation-based inferencemulti-compartment |
| spellingShingle | Jakob Kaiser Raphael Stock Eric Müller Johannes Schemmel Sebastian Schmitt Simulation-based inference for model parameterization on analog neuromorphic hardware analog neuromorphic simulation-based inference multi-compartment |
| title | Simulation-based inference for model parameterization on analog neuromorphic hardware |
| title_full | Simulation-based inference for model parameterization on analog neuromorphic hardware |
| title_fullStr | Simulation-based inference for model parameterization on analog neuromorphic hardware |
| title_full_unstemmed | Simulation-based inference for model parameterization on analog neuromorphic hardware |
| title_short | Simulation-based inference for model parameterization on analog neuromorphic hardware |
| title_sort | simulation based inference for model parameterization on analog neuromorphic hardware |
| topic | analog neuromorphic simulation-based inference multi-compartment |
| url | https://doi.org/10.1088/2634-4386/ad046d |
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