The complete chloroplast genome of Camellia fluviatilis (Theaceae), a wild oil-Camellia species

Camellia fluviatilis is an important shrub producing edible seed oil, which is widely cultivated in South China. In this study, the complete chloroplast genome was sequenced and analyzed based on the Illumina HiSeq platform. The results showed that the complete chloroplast genome is 157,041 bp with...

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Published in:Mitochondrial DNA. Part B. Resources
Main Authors: Meiying Yang, Fengyu Xie, Jianbin Li, Ying Zhang, Xinlei Li, Hengfu Yin, Jiyuan Li
Format: Article
Language:English
Published: Taylor & Francis Group 2021-12-01
Subjects:
camellia fluviatilis
chloroplast genome
phylogenetic analysis
Online Access:http://dx.doi.org/10.1080/23802359.2021.2005482
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author Meiying Yang
Fengyu Xie
Jianbin Li
Ying Zhang
Xinlei Li
Hengfu Yin
Jiyuan Li
author_facet Meiying Yang
Fengyu Xie
Jianbin Li
Ying Zhang
Xinlei Li
Hengfu Yin
Jiyuan Li
author_sort Meiying Yang
collection DOAJ
container_title Mitochondrial DNA. Part B. Resources
description Camellia fluviatilis is an important shrub producing edible seed oil, which is widely cultivated in South China. In this study, the complete chloroplast genome was sequenced and analyzed based on the Illumina HiSeq platform. The results showed that the complete chloroplast genome is 157,041 bp with 37.29% GC content, including a large single copy (LSC) region of 86,718 bp, a small single copy (SSC) region of 18,293 bp, and a pair of inverted repeats (IRs) regions of 26,015 bp. There are 128 genes in the chloroplast genome of C. fluviatilis, including 83 protein-coding genes, 8 ribosomal RNAs, and 37 transfer RNAs. Phylogenetic analysis revealed that C. fluviatilis is closely related to C. lanceoleosa, indicating that both belong to the Sect. Paracamellia Sealy.
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spelling doaj-art-fa0fe69fcc064d2eb8b7ceeb73b0ebf72025-08-19T22:13:03ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592021-12-016123511351210.1080/23802359.2021.20054822005482The complete chloroplast genome of Camellia fluviatilis (Theaceae), a wild oil-Camellia speciesMeiying Yang0Fengyu Xie1Jianbin Li2Ying Zhang3Xinlei Li4Hengfu Yin5Jiyuan Li6Research Institute of Subtropical Forestry, Chinese Academy of ForestryResearch Institute of Subtropical Forestry, Chinese Academy of ForestryCollege of Agronomy and Biotechnology, Yunnan Agricultural UniversityResearch Institute of Subtropical Forestry, Chinese Academy of ForestryResearch Institute of Subtropical Forestry, Chinese Academy of ForestryResearch Institute of Subtropical Forestry, Chinese Academy of ForestryResearch Institute of Subtropical Forestry, Chinese Academy of ForestryCamellia fluviatilis is an important shrub producing edible seed oil, which is widely cultivated in South China. In this study, the complete chloroplast genome was sequenced and analyzed based on the Illumina HiSeq platform. The results showed that the complete chloroplast genome is 157,041 bp with 37.29% GC content, including a large single copy (LSC) region of 86,718 bp, a small single copy (SSC) region of 18,293 bp, and a pair of inverted repeats (IRs) regions of 26,015 bp. There are 128 genes in the chloroplast genome of C. fluviatilis, including 83 protein-coding genes, 8 ribosomal RNAs, and 37 transfer RNAs. Phylogenetic analysis revealed that C. fluviatilis is closely related to C. lanceoleosa, indicating that both belong to the Sect. Paracamellia Sealy.http://dx.doi.org/10.1080/23802359.2021.2005482camellia fluviatilischloroplast genomephylogenetic analysis
spellingShingle Meiying Yang
Fengyu Xie
Jianbin Li
Ying Zhang
Xinlei Li
Hengfu Yin
Jiyuan Li
The complete chloroplast genome of Camellia fluviatilis (Theaceae), a wild oil-Camellia species
camellia fluviatilis
chloroplast genome
phylogenetic analysis
title The complete chloroplast genome of Camellia fluviatilis (Theaceae), a wild oil-Camellia species
title_full The complete chloroplast genome of Camellia fluviatilis (Theaceae), a wild oil-Camellia species
title_fullStr The complete chloroplast genome of Camellia fluviatilis (Theaceae), a wild oil-Camellia species
title_full_unstemmed The complete chloroplast genome of Camellia fluviatilis (Theaceae), a wild oil-Camellia species
title_short The complete chloroplast genome of Camellia fluviatilis (Theaceae), a wild oil-Camellia species
title_sort complete chloroplast genome of camellia fluviatilis theaceae a wild oil camellia species
topic camellia fluviatilis
chloroplast genome
phylogenetic analysis
url http://dx.doi.org/10.1080/23802359.2021.2005482
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