Impact of Salinity on the Gastrointestinal Bacterial Community of Theodoxus fluviatilis

by Carmen Kivistik, Jan Knobloch, Kairi Käiro, Helen Tammert, Veljo Kisand, Veljo Kisand, Jan-Peter Hildebrandt, Daniel P. R. Herlemann
Published 2020-05-01

Effect of Environmental Factors and an Emerging Parasitic Disease on Gut Microbiome of Wild Salmonid Fish

by Anti Vasemagi, Marko Visse, Veljo Kisand, Ira J. Blader
Published 2017-12-01

Phylogenetic and functional metagenomic profiling for assessing microbial biodiversity in environmental monitoring.

by Veljo Kisand, Angelica Valente, Armin Lahm, Gerard Tanet, Teresa Lettieri
Published 2012-01-01

A k-mer-based method for the identification of phenotype-associated genomic biomarkers and predicting phenotypes of sequenced bacteria.

by Erki Aun, Age Brauer, Veljo Kisand, Tanel Tenson, Maido Remm
Published 2018-10-01

Sedimentary Ancient DNA (sedaDNA) Reveals Fungal Diversity and Environmental Drivers of Community Changes throughout the Holocene in the Present Boreal Lake Lielais Svētiņu (Easter...

by Liisi Talas, Normunds Stivrins, Siim Veski, Leho Tedersoo, Veljo Kisand
Published 2021-03-01

Distinct bacterial communities in tropical island aquifers.

by Marek Kirs, Veljo Kisand, Craig E Nelson, Tineill Dudoit, Philip S Moravcik
Published 2020-01-01

Redox-specialized bacterioplankton metacommunity in a temperate estuary.

by Peeter Laas, Jaak Simm, Inga Lips, Urmas Lips, Veljo Kisand, Madis Metsis
Published 2015-01-01

Endophytic bacterial communities in peels and pulp of five root vegetables.

by Viia Kõiv, Krõõt Arbo, Ülo Maiväli, Veljo Kisand, Märt Roosaare, Maido Remm, Tanel Tenson
Published 2019-01-01

Near-Bottom Hypoxia Impacts Dynamics of Bacterioplankton Assemblage throughout Water Column of the Gulf of Finland (Baltic Sea).

by Peeter Laas, Elina Šatova, Inga Lips, Urmas Lips, Jaak Simm, Veljo Kisand, Madis Metsis
Published 2016-01-01

Abundances of tetracycline, sulphonamide and beta-lactam antibiotic resistance genes in conventional wastewater treatment plants (WWTPs) with different waste load.

by Mailis Laht, Antti Karkman, Veiko Voolaid, Christian Ritz, Tanel Tenson, Marko Virta, Veljo Kisand
Published 2014-01-01

Highly Continuous Genome Assembly of Eurasian Perch (Perca fluviatilis) Using Linked-Read Sequencing

by Mikhail Yu. Ozerov, Freed Ahmad, Riho Gross, Lilian Pukk, Siim Kahar, Veljo Kisand, Anti Vasemägi
Published 2018-12-01

Multidrug resistant Pseudomonas aeruginosa in Estonian hospitals

by Kaidi Telling, Mailis Laht, Age Brauer, Maido Remm, Veljo Kisand, Matti Maimets, Tanel Tenson, Irja Lutsar
Published 2018-10-01

Using Microcystin Gene Copies to Determine Potentially-Toxic Blooms, Example from a Shallow Eutrophic Lake Peipsi

by Kristel Panksep, Marju Tamm, Evanthia Mantzouki, Anne Rantala-Ylinen, Reet Laugaste, Kaarina Sivonen, Olga Tammeorg, Veljo Kisand
Published 2020-03-01

Molecular Characterization of Enterococcus Isolates From Different Sources in Estonia Reveals Potential Transmission of Resistance Genes Among Different Reservoirs

by Erki Aun, Veljo Kisand, Mailis Laht, Kaidi Telling, Piret Kalmus, Ülo Väli, Age Brauer, Maido Remm, Tanel Tenson
Published 2021-03-01

Characteristics of Extended-Spectrum Beta-Lactamase-Producing Enterobacteriaceae and Contact to Animals in Estonia

by Kaidi Telling, Age Brauer, Mailis Laht, Piret Kalmus, Karolin Toompere, Veljo Kisand, Matti Maimets, Maido Remm, Tanel Tenson, Irja Lutsar
Published 2020-07-01

From bacteria to piscivorous fish: estimates of whole-lake and component-specific metabolism with an ecosystem approach.

by Fabien Cremona, Toomas Kõiv, Veljo Kisand, Alo Laas, Priit Zingel, Helen Agasild, Tõnu Feldmann, Ain Järvalt, Peeter Nõges, Tiina Nõges
Published 2014-01-01

Humic-acid-driven escape from eye parasites revealed by RNA-seq and target-specific metabarcoding

by Kristina Noreikiene, Mikhail Ozerov, Freed Ahmad, Toomas Kõiv, Siim Kahar, Riho Gross, Margot Sepp, Antonia Pellizzone, Eero J. Vesterinen, Veljo Kisand, Anti Vasemägi
Published 2020-08-01

Shotgun metagenomes and multiple primer pair-barcode combinations of amplicons reveal biases in metabarcoding analyses of fungi

by Leho Tedersoo, Sten Anslan, Mohammad Bahram, Sergei Põlme, Taavi Riit, Ingrid Liiv, Urmas Kõljalg, Veljo Kisand, Henrik Nilsson, Falk Hildebrand, Peer Bork, Kessy Abarenkov
Published 2015-05-01

Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations

by Eric Capo, Charline Giguet-Covex, Alexandra Rouillard, Kevin Nota, Peter D. Heintzman, Aurèle Vuillemin, Daniel Ariztegui, Fabien Arnaud, Simon Belle, Stefan Bertilsson, Christian Bigler, Richard Bindler, Antony G. Brown, Charlotte L. Clarke, Sarah E. Crump, Didier Debroas, Göran Englund, Gentile Francesco Ficetola, Rebecca E. Garner, Joanna Gauthier, Irene Gregory-Eaves, Liv Heinecke, Ulrike Herzschuh, Anan Ibrahim, Veljo Kisand, Kurt H. Kjær, Youri Lammers, Joanne Littlefair, Erwan Messager, Marie-Eve Monchamp, Fredrik Olajos, William Orsi, Mikkel W. Pedersen, Dilli P. Rijal, Johan Rydberg, Trisha Spanbauer, Kathleen R. Stoof-Leichsenring, Pierre Taberlet, Liisi Talas, Camille Thomas, David A. Walsh, Yucheng Wang, Eske Willerslev, Anne van Woerkom, Heike H. Zimmermann, Marco J. L. Coolen, Laura S. Epp, Isabelle Domaizon, Inger G. Alsos, Laura Parducci
Published 2021-02-01

A global multinational survey of cefotaxime-resistant coliforms in urban wastewater treatment plants

by Roberto B.M. Marano, Telma Fernandes, Célia M. Manaia, Olga Nunes, Donald Morrison, Thomas U. Berendonk, Norbert Kreuzinger, Tanel Telson, Gianluca Corno, Despo Fatta-Kassinos, Christophe Merlin, Edward Topp, Edouard Jurkevitch, Leonie Henn, Andrew Scott, Stefanie Heß, Katarzyna Slipko, Mailis Laht, Veljo Kisand, Andrea Di Cesare, Popi Karaolia, Stella G. Michael, Alice L. Petre, Roberto Rosal, Amy Pruden, Virginia Riquelme, Ana Agüera, Belen Esteban, Aneta Luczkiewicz, Agnieszka Kalinowska, Anne Leonard, William H. Gaze, Anthony A. Adegoke, Thor A. Stenstrom, Alfieri Pollice, Carlo Salerno, Carsten U. Schwermer, Pawel Krzeminski, Hélène Guilloteau, Erica Donner, Barbara Drigo, Giovanni Libralato, Marco Guida, Helmut Bürgmann, Karin Beck, Hemda Garelick, Marta Tacão, Isabel Henriques, Isabel Martínez-Alcalá, Jose M. Guillén-Navarro, Magdalena Popowska, Marta Piotrowska, Marcos Quintela-Baluja, Joshua T. Bunce, Maria I. Polo-López, Samira Nahim–Granados, Marie-Noëlle Pons, Milena Milakovic, Nikolina Udikovic-Kolic, Jérôme Ory, Traore Ousmane, Pilar Caballero, Antoni Oliver, Sara Rodriguez-Mozaz, Jose L. Balcazar, Thomas Jäger, Thomas Schwartz, Ying Yang, Shichun Zou, Yunho Lee, Younggun Yoon, Bastian Herzog, Heidrun Mayrhofer, Om Prakash, Yogesh Nimonkar, Ester Heath, Anna Baraniak, Joana Abreu-Silva, Manika Choudhury, Leonardo P. Munoz, Stela Krizanovic, Gianluca Brunetti, Ayella Maile-Moskowitz, Connor Brown, Eddie Cytryn
Published 2020-11-01