Search Results - Alexander V Predeus

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  1. 1

    Transcriptomic profiling of Escherichia coli K-12 in response to a compendium of stressors by Rama P. Bhatia, Hande A. Kirit, Alexander V. Predeus, Jonathan P. Bollback

    Published in Scientific Reports (2022-05-01)
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  2. 2

    Author Correction: Transcriptomic profiling of Escherichia coli K-12 in response to a compendium of stressors by Rama P. Bhatia, Hande A. Kirit, Alexander V. Predeus, Jonathan P. Bollback

    Published in Scientific Reports (2022-10-01)
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  3. 3

    Systematic benchmark of state-of-the-art variant calling pipelines identifies major factors affecting accuracy of coding sequence variant discovery by Yury A. Barbitoff, Ruslan Abasov, Varvara E. Tvorogova, Andrey S. Glotov, Alexander V. Predeus

    Published in BMC Genomics (2022-02-01)
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  4. 4

    Long-Range Signaling in MutS and MSH Homologs via Switching of Dynamic Communication Pathways. by Beibei Wang, Joshua Francis, Monika Sharma, Sean M Law, Alexander V Predeus, Michael Feig

    Published in PLoS Computational Biology (2016-10-01)
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  5. 5

    New Intranuclear Symbiotic Bacteria from Macronucleus of <i>Paramecium putrinum</i>—“<i>Candidatus</i> Gortzia Yakutica” by Alexandra Y. Beliavskaia, Alexander V. Predeus, Sofya K. Garushyants, Maria D. Logacheva, Jun Gong, Songbao Zou, Mikhail S. Gelfand, Maria S. Rautian

    Published in Diversity (2020-05-01)
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  6. 6

    P444: SINGLE CELL RNASEQ UNCOVERING THE ROLE OF A LEUKEMIC DRIVER GENE FUSION CBFΒ::MYH11 IN THE LEUKEMIC–NICHE SIGNALING by Polina Derevyanko, Alexandra V Dolgikh, Minoo Ashtiani, Anja Krippner-Heidenreich, Ryan Nelson, John Bushweller, Yury Barbitoff, Alexander V Predeus, Olaf Heidenreich

    Published in HemaSphere (2023-08-01)
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  7. 7

    LMNA R482L mutation causes impairments in C2C12 myoblasts subpopulations, alterations in metabolic reprogramming during differentiation, and oxidative stress by Oksana A. Ivanova, Alexander V. Predeus, Margarita Y. Sorokina, Elena V. Ignatieva, Danila E. Bobkov, Kseniia S. Sukhareva, Anna A. Kostareva, Renata I. Dmitrieva

    Published in Scientific Reports (2025-02-01)
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  8. 8

    Species-Specific Proteins in the Oviducts of Snail Sibling Species: Proteotranscriptomic Study of <i>Littorina fabalis</i> and <i>L. obtusata</i> by Arseniy A. Lobov, Irina Y. Babkina, Lavrentii G. Danilov, Alexey E. Masharskiy, Alexander V. Predeus, Natalia A. Mikhailova, Andrei I. Granovitch, Arina L. Maltseva

    Published in Biology (2021-10-01)
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  9. 9

    Intracellular niche-specific profiling reveals transcriptional adaptations required for the cytosolic lifestyle of Salmonella enterica. by TuShun R Powers, Amanda L Haeberle, Alexander V Predeus, Disa L Hammarlöf, Jennifer A Cundiff, Zeus Saldaña-Ahuactzi, Karsten Hokamp, Jay C D Hinton, Leigh A Knodler

    Published in PLoS Pathogens (2021-08-01)
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  10. 10

    Modulation of Salmonella virulence by a novel SPI-2 injectisome effector that interacts with the dystrophin-associated protein complex by Xiu-Jun Yu, Haixia Xie, Yan Li, Mei Liu, Ruhong Hou, Alexander V. Predeus, Blanca M. Perez Sepulveda, Jay C. D. Hinton, David W. Holden, Teresa L. M. Thurston

    Published in mBio (2024-07-01)
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  11. 11

    Potential links between human bloodstream infection by Salmonella enterica serovar Typhimurium and international transmission to Colombia. by Yan Li, Caisey V Pulford, Paula Díaz, Blanca M Perez-Sepulveda, Carolina Duarte, Alexander V Predeus, Magdalena Wiesner, Darren Heavens, Ross Low, Christian Schudoma, Angeline Montaño, Neil Hall, Jaime Moreno, Jay C D Hinton

    Published in PLoS Neglected Tropical Diseases (2025-01-01)
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  12. 12

    Whole‐exome sequencing provides insights into monogenic disease prevalence in Northwest Russia by Yury A. Barbitoff, Rostislav K. Skitchenko, Olga I. Poleshchuk, Anton E. Shikov, Elena A. Serebryakova, Yulia A. Nasykhova, Dmitrii E. Polev, Anna R. Shuvalova, Irina V. Shcherbakova, Mikhail A. Fedyakov, Oleg S. Glotov, Andrey S. Glotov, Alexander V. Predeus

    Published in Molecular Genetics & Genomic Medicine (2019-11-01)
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  13. 13

    An accessible, efficient and global approach for the large-scale sequencing of bacterial genomes by Blanca M. Perez-Sepulveda, Darren Heavens, Caisey V. Pulford, Alexander V. Predeus, Ross Low, Hermione Webster, Gregory F. Dykes, Christian Schudoma, Will Rowe, James Lipscombe, Chris Watkins, Benjamin Kumwenda, Neil Shearer, Karl Costigan, Kate S. Baker, Nicholas A. Feasey, Jay C. D. Hinton, Neil Hall, The 10KSG consortium

    Published in Genome Biology (2021-12-01)
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  14. 14

    Adding function to the genome of African Salmonella Typhimurium ST313 strain D23580. by Rocío Canals, Disa L Hammarlöf, Carsten Kröger, Siân V Owen, Wai Yee Fong, Lizeth Lacharme-Lora, Xiaojun Zhu, Nicolas Wenner, Sarah E Carden, Jared Honeycutt, Denise M Monack, Robert A Kingsley, Philip Brownridge, Roy R Chaudhuri, Will P M Rowe, Alexander V Predeus, Karsten Hokamp, Melita A Gordon, Jay C D Hinton

    Published in PLoS Biology (2019-01-01)
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  15. 15

    Single-cell and spatially resolved interactomics of tooth-associated keratinocytes in periodontitis by Quinn T. Easter, Bruno Fernandes Matuck, Germán Beldorati Stark, Catherine L. Worth, Alexander V. Predeus, Brayon Fremin, Khoa Huynh, Vaishnavi Ranganathan, Zhi Ren, Diana Pereira, Brittany T. Rupp, Theresa Weaver, Kathryn Miller, Paola Perez, Akira Hasuike, Zhaoxu Chen, Mandy Bush, Xufeng Qu, Janice Lee, Scott H. Randell, Shannon M. Wallet, Inês Sequeira, Hyun Koo, Katarzyna M. Tyc, Jinze Liu, Kang I. Ko, Sarah A. Teichmann, Kevin M. Byrd

    Published in Nature Communications (2024-06-01)
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