A chromosome-level, haplotype-phased Vanilla planifolia genome highlights the challenge of partial endoreplication for accurate whole-genome assembly

Vanilla planifolia, the species cultivated to produce one of the world’s most popular flavors, is highly prone to partial genome endoreplication, which leads to highly unbalanced DNA content in cells. We report here the first molecular evidence of partial endoreplication at the chromosome scale by t...

Full description

Bibliographic Details

Published in:	Plant Communications
Main Authors:	Quentin Piet, Gaetan Droc, William Marande, Gautier Sarah, Stéphanie Bocs, Christophe Klopp, Mickael Bourge, Sonja Siljak-Yakovlev, Olivier Bouchez, Céline Lopez-Roques, Sandra Lepers-Andrzejewski, Laurent Bourgois, Joseph Zucca, Michel Dron, Pascale Besse, Michel Grisoni, Cyril Jourda, Carine Charron
Format:	Article
Language:	English
Published:	Elsevier 2022-09-01
Subjects:	vanilla whole-genome sequencing optical mapping partial endoreplication genome hub
Online Access:	http://www.sciencedirect.com/science/article/pii/S2590346222000803