Binning Metagenomic Contigs Using Contig Embedding and Decomposed Tetranucleotide Frequency

Metagenomic binning is a crucial step in metagenomic research. It can aggregate the genome sequences belonging to the same microbial species into independent bins. Most existing methods ignore the semantic information of contigs and lack effective processing of tetranucleotide frequency, resulting i...

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發表在:	Biology
Main Authors:	Long Fu, Jiabin Shi, Baohua Huang
格式:	Article
語言:	英语
出版:	MDPI AG 2024-09-01
主題:	metagenomics binning BERT tetranucleotide non-negative matrix factorization (NMF) Approximate Nearest Neighbors Oh Yeah (Annoy)
在線閱讀:	https://www.mdpi.com/2079-7737/13/10/755