PhyIN: trimming alignments by phylogenetic incompatibilities among neighbouring sites

In phylogenomics, regions of low alignment reliability and high noise are typically trimmed from multiple sequence alignments before they are used in phylogenetic inference. I introduce a new trimming tool, PhyIN, which deletes regions in which a large proportion of sites (characters) have conflicti...

詳細記述

書誌詳細
出版年:PeerJ
第一著者: Wayne P. Maddison
フォーマット: 論文
言語:英語
出版事項: PeerJ Inc. 2024-12-01
主題:
オンライン・アクセス:https://peerj.com/articles/18504.pdf