Detection of viral contamination in cell lines using ViralCellDetector

Background and aimsCell lines are widely used in biomedical research to investigate various biological processes, including gene expression, cancer progression, and drug responses. However, cross-contamination with bacteria, mycoplasma, and viruses remains a persistent challenge. While the detection...

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Bibliographic Details
Published in:Frontiers in Microbiology
Main Authors: Rama Shankar, Shreya Paithankar, Suchir Gupta, Bin Chen
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-08-01
Subjects:
cell lines
viral contamination
bacterial contamination
differentially expressed genes
RNA-seq data
random forest
Online Access:https://www.frontiersin.org/articles/10.3389/fmicb.2025.1595180/full

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https://www.frontiersin.org/articles/10.3389/fmicb.2025.1595180/full

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