An in-depth evaluation of metagenomic classifiers for soil microbiomes

Abstract Background Recent endeavours in metagenomics, exemplified by projects such as the human microbiome project and TARA Oceans, have illuminated the complexities of microbial biomes. A robust bioinformatic pipeline and meticulous evaluation of their methodology have contributed to the success o...

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發表在:	Environmental Microbiome
Main Authors:	Niranjana Rose Edwin, Amy Heather Fitzpatrick, Fiona Brennan, Florence Abram, Orla O’Sullivan
格式:	Article
語言:	英语
出版:	BMC 2024-03-01
主題:	Shotgun metagenomics Taxonomic classifier comparison Soil microbiome Genome taxonomy database Kraken2 Bracken
在線閱讀:	https://doi.org/10.1186/s40793-024-00561-w