Core/Whole Genome Multilocus Sequence Typing and Core Genome SNP-Based Typing of OXA-48-Producing Klebsiella pneumoniae Clinical Isolates From Spain

Whole-genome sequencing (WGS)-based typing methods have emerged as promising and highly discriminative epidemiological tools. In this study, we combined gene-by-gene allele calling and core genome single nucleotide polymorphism (cgSNP) approaches to investigate the genetic relatedness of a well-char...

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Bibliographic Details

Published in:	Frontiers in Microbiology
Main Authors:	Elisenda Miro, John W. A. Rossen, Monika A. Chlebowicz, Dag Harmsen, Sylvain Brisse, Virginie Passet, Ferran Navarro, Alex W. Friedrich, S. García-Cobos
Format:	Article
Language:	English
Published:	Frontiers Media S.A. 2020-01-01
Subjects:	K. pneumoniae OXA-48 cgMLST wgMLST WGS molecular epidemiology
Online Access:	https://www.frontiersin.org/article/10.3389/fmicb.2019.02961/full