Mining alternative splicing patterns in scRNA-seq data using scASfind

Abstract Single-cell RNA-seq (scRNA-seq) is widely used for transcriptome profiling, but most analyses focus on gene-level events, with less attention devoted to alternative splicing. Here, we present scASfind, a novel computational method to allow for quantitative analysis of cell type-specific spl...

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Bibliographic Details

Published in:	Genome Biology
Main Authors:	Yuyao Song, Guillermo Parada, Jimmy Tsz Hang Lee, Martin Hemberg
Format:	Article
Language:	English
Published:	BMC 2024-07-01
Subjects:	Alternative splicing Single cell RNA-seq Cell type-specific events
Online Access:	https://doi.org/10.1186/s13059-024-03323-6