TIANA: transcription factors cooperativity inference analysis with neural attention

Abstract Background Growing evidence suggests that distal regulatory elements are essential for cellular function and states. The sequences within these distal elements, especially motifs for transcription factor binding, provide critical information about the underlying regulatory programs. However...

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Bibliographic Details

Published in:	BMC Bioinformatics
Main Authors:	Rick Z. Li, Claudia Z. Han, Christopher K. Glass
Format:	Article
Language:	English
Published:	BMC 2024-08-01
Subjects:	Self-attention Transcription Factors Deep Learning Integrated gradients Bioinformatics
Online Access:	https://doi.org/10.1186/s12859-024-05852-0