MSI expresso: a software for determining MSI status and detecting MSI-related transcription events from RNA sequencing data

Summary: Microsatellite instability (MSI) is becoming increasingly important in oncology as it has been reported across more than two dozen of solid cancer types. The MSI-high phenotype has long been used as a predictive and prognostic marker in colorectal cancer and has been recently approved by th...

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Bibliographic Details

Published in:	Frontiers in Genetics
Main Authors:	Emmanuel Tubacher, Alexandre How-Kit, Mourad Sahbatou, Alex Duval, Victor Renault, Jean-François Deleuze
Format:	Article
Language:	English
Published:	Frontiers Media S.A. 2025-04-01
Subjects:	microsatellite instability cancer rnaseq exon skipping circos UTR
Online Access:	https://www.frontiersin.org/articles/10.3389/fgene.2025.1523278/full