TiPS: Rapidly simulating trajectories and phylogenies from compartmental models

Abstract Stochastic population dynamics simulations are essential for many ecological and epidemiological studies to generate time series and genealogies that capture the relatedness between individuals. Many software packages allow one to simulate phylogenetic trees but these tend to suffer from on...

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Bibliographic Details

Published in:	Methods in Ecology and Evolution
Main Authors:	Gonché Danesh, Emma Saulnier, Olivier Gascuel, Marc Choisy, Samuel Alizon
Format:	Article
Language:	English
Published:	Wiley 2023-02-01
Subjects:	compartmental models phylogenies population dynamics R package stochastic simulations
Online Access:	https://doi.org/10.1111/2041-210X.14038