Design and Direct Assembly of Synthesized Uracil-containing Non-clonal DNA Fragments into Vectors by USERTM Cloning

This protocol describes how to order and directly assemble uracil-containing non-clonal DNA fragments by uracil excision based cloning (USER cloning). The protocol was generated with the goal of making synthesized non-clonal DNA fragments directly compatible with USERTM cloning. The protocol is high...

Full description

Bibliographic Details
Published in:Bio-Protocol
Main Authors: Morten Jørgensen, Nikolai Wulff, Majse Nafisi, Deyang Xu, Cuiwei Wang, Sophie Lambertz, Zeinu Belew, Hussam Nour-Eldin
Format: Article
Language:English
Published: Bio-protocol LLC 2017-11-01
Online Access:https://bio-protocol.org/en/bpdetail?id=2615&type=0
_version_ 1850147072490078208
author Morten Jørgensen
Nikolai Wulff
Majse Nafisi
Deyang Xu
Cuiwei Wang
Sophie Lambertz
Zeinu Belew
Hussam Nour-Eldin
author_facet Morten Jørgensen
Nikolai Wulff
Majse Nafisi
Deyang Xu
Cuiwei Wang
Sophie Lambertz
Zeinu Belew
Hussam Nour-Eldin
author_sort Morten Jørgensen
collection DOAJ
container_title Bio-Protocol
description This protocol describes how to order and directly assemble uracil-containing non-clonal DNA fragments by uracil excision based cloning (USER cloning). The protocol was generated with the goal of making synthesized non-clonal DNA fragments directly compatible with USERTM cloning. The protocol is highly efficient and would be compatible with uracil-containing non-clonal DNA fragments obtained from any synthesizing company. The protocol drastically reduces time and handling between receiving the synthesized DNA fragments and transforming with vector and DNA fragment(s).
format Article
id doaj-art-d2a4b831c44f4fdbabab3edc2cc70fe7
institution Directory of Open Access Journals
issn 2331-8325
language English
publishDate 2017-11-01
publisher Bio-protocol LLC
record_format Article
spelling doaj-art-d2a4b831c44f4fdbabab3edc2cc70fe72025-08-19T23:46:57ZengBio-protocol LLCBio-Protocol2331-83252017-11-0172210.21769/BioProtoc.2615Design and Direct Assembly of Synthesized Uracil-containing Non-clonal DNA Fragments into Vectors by USERTM CloningMorten Jørgensen0Nikolai Wulff1Majse Nafisi2Deyang Xu3Cuiwei Wang4Sophie Lambertz5Zeinu Belew6Hussam Nour-Eldin7University of Würzburg, Institute for Molecular Plant Physiology and Biophysics, Würzburg, GermanyDynaMo Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkCopenhagen Plant Science Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkCopenhagen Plant Science Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkPlant Biochemistry Laboratory, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkDynaMo Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkCopenhagen Plant Science Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkDynaMo Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkCopenhagen Plant Science Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkDynaMo Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkCopenhagen Plant Science Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkDynaMo Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkCopenhagen Plant Science Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkDynaMo Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkCopenhagen Plant Science Center, Department of Plant and Environmental Sciences, Faculty of Science, University of Copenhagen, Frederiksberg C, DenmarkThis protocol describes how to order and directly assemble uracil-containing non-clonal DNA fragments by uracil excision based cloning (USER cloning). The protocol was generated with the goal of making synthesized non-clonal DNA fragments directly compatible with USERTM cloning. The protocol is highly efficient and would be compatible with uracil-containing non-clonal DNA fragments obtained from any synthesizing company. The protocol drastically reduces time and handling between receiving the synthesized DNA fragments and transforming with vector and DNA fragment(s). https://bio-protocol.org/en/bpdetail?id=2615&type=0
spellingShingle Morten Jørgensen
Nikolai Wulff
Majse Nafisi
Deyang Xu
Cuiwei Wang
Sophie Lambertz
Zeinu Belew
Hussam Nour-Eldin
Design and Direct Assembly of Synthesized Uracil-containing Non-clonal DNA Fragments into Vectors by USERTM Cloning
title Design and Direct Assembly of Synthesized Uracil-containing Non-clonal DNA Fragments into Vectors by USERTM Cloning
title_full Design and Direct Assembly of Synthesized Uracil-containing Non-clonal DNA Fragments into Vectors by USERTM Cloning
title_fullStr Design and Direct Assembly of Synthesized Uracil-containing Non-clonal DNA Fragments into Vectors by USERTM Cloning
title_full_unstemmed Design and Direct Assembly of Synthesized Uracil-containing Non-clonal DNA Fragments into Vectors by USERTM Cloning
title_short Design and Direct Assembly of Synthesized Uracil-containing Non-clonal DNA Fragments into Vectors by USERTM Cloning
title_sort design and direct assembly of synthesized uracil containing non clonal dna fragments into vectors by usertm cloning
url https://bio-protocol.org/en/bpdetail?id=2615&type=0
work_keys_str_mv AT mortenjørgensen designanddirectassemblyofsynthesizeduracilcontainingnonclonaldnafragmentsintovectorsbyusertmcloning
AT nikolaiwulff designanddirectassemblyofsynthesizeduracilcontainingnonclonaldnafragmentsintovectorsbyusertmcloning
AT majsenafisi designanddirectassemblyofsynthesizeduracilcontainingnonclonaldnafragmentsintovectorsbyusertmcloning
AT deyangxu designanddirectassemblyofsynthesizeduracilcontainingnonclonaldnafragmentsintovectorsbyusertmcloning
AT cuiweiwang designanddirectassemblyofsynthesizeduracilcontainingnonclonaldnafragmentsintovectorsbyusertmcloning
AT sophielambertz designanddirectassemblyofsynthesizeduracilcontainingnonclonaldnafragmentsintovectorsbyusertmcloning
AT zeinubelew designanddirectassemblyofsynthesizeduracilcontainingnonclonaldnafragmentsintovectorsbyusertmcloning
AT hussamnoureldin designanddirectassemblyofsynthesizeduracilcontainingnonclonaldnafragmentsintovectorsbyusertmcloning