The HIV-1 Glycan Shield: Strategically Placed Kinks in the Armor Improve Antigen Design

by Karsten, Christina Beatrice, Alter, Galit
Published 2017

Systematic identification of edited microRNAs in the human brain

by Alon, Shahar, Mor, Eyal, Vigneault, Francois, Church, George M., Locatelli, Franco, Galeano, Federica, Gallo, Angela, Shomron, Noam, Eisenberg, Eli
Published 2013

Barcoding bias in high-throughput multiplex sequencing of miRNA

by Alon, Shahar, Vigneault, Francois, Eminaga, Seda, Christodoulou, Danos C., Seidman, Jonathan G., Church, George M., Eisenberg, Eli
Published 2013

Holes in the Glycan Shield of the Native HIV Envelope Are a Target of Trimer-Elicited Neutralizing Antibodies

by McCoy, Laura E, van Gils, Marit J, Ozorowski, Gabriel, Messmer, Terrence, Briney, Bryan, Voss, James E, Kulp, Daniel W, Macauley, Matthew S, Sok, Devin, Pauthner, Matthias, Menis, Sergey, Cottrell, Christopher A, Torres, Jonathan L, Hsueh, Jessica, Schief, William R, Wilson, Ian A, Ward, Andrew B, Sanders, Rogier W, Burton, Dennis R
Published 2016

Macaque studies of vaccine and microbicide combinations for preventing HIV-1 sexual transmission

by Klasse, Per Johan, Dufour, Jason, Veazey, Ronald S., Barouch, Dan H., Moore, John P.
Published 2012

Neutralizing anti-HIV antibodies develop in a humanized

by Seung, E., Dugast, Anne-Sophie, Dudek, T., Mattoo, H., Vrbanac, V., Tivey, T., Murooka, T., Cariappa, A., Luster, Andrew D., Pillai, S., Tager, A. M.
Published 2013

Crystal structure of the DNA binding domain of the transcription factor T-bet suggests simultaneous recognition of distant genome sites

by Liu, Ce Feng, Brandt, Gabriel S., Hoang, Quyen Q., Naumova, Natalia, Lazarevic, Vanja, Hwang, Eun Sook, Dekker, Job, Ringe, Dagmar, Petsko, Gregory A., Glimcher, Laurie H
Published 2017

Dissecting the common and compartment-specific features of COVID-19 severity in the lung and periphery with single-cell resolution

by Overholt, Kalon J., Krog, Jonathan R., Zanoni, Ivan, Bryson, Bryan D.
Published 2021

Single-shot Ad26 vaccine protects against SARS-CoV-2 in rhesus macaques

by Mercado, Noe B., Zahn, Roland, Wegmann, Frank, Loos, Carolin, Chandrashekar, Abishek, Yu, Jingyou, Liu, Jinyan, Peter, Lauren, McMahan, Katherine, Tostanoski, Lisa H., He, Xuan, Martinez, David R., Rutten, Lucy, Bos, Rinke, van Manen, Danielle, Vellinga, Jort, Custers, Jerome, Langedijk, Johannes P., Kwaks, Ted, Bakkers, Mark J. G., Zuijdgeest, David, Rosendahl Huber, Sietske K., Atyeo, Caroline, Fischinger, Stephanie, Burke, John, Feldman, Jared, Hauser, Blake Marie, Caradonna, Timothy M., Bondzie, Esther A., Dagotto, Gabriel, Gebre, Makda S., Hoffman, Emily, Jacob-Dolan, Catherine, Kirilova, Marinela, Li, Zhenfeng, Lin, Zijin, Mahrokhian, Shant H., Maxfield, Lori F., Nampanya, Felix, Nityanandam, Ramya, Nkolola, Joseph P., Patel, Shivani, Ventura, John D., Verrington, Kaylee, Wan, Huahua, Pessaint, Laurent, Van Ry, Alex, Blade, Kelvin, Strasbaugh, Amanda, Cabus, Mehtap, Brown, Renita, Cook, Anthony, Zouantchangadou, Serge, Teow, Elyse, Andersen, Hanne, Lewis, Mark G., Cai, Yongfei, Chen, Bing, Schmidt, Aaron G., Reeves, R. Keith, Baric, Ralph S., Lauffenburger, Douglas A., Alter, Galit, Stoffels, Paul, Mammen, Mathai, Van Hoof, Johan, Schuitemaker, Hanneke, Barouch, Dan
Published 2021

Comorbid illnesses are associated with altered adaptive immune responses to SARS-CoV-2

by Yu, Krystle K.Q, Fischinger, Stephanie, Smith, Malisa T., Atyeo, Caroline, Cizmeci, Deniz, Wolf, Caitlin R., Layton, Erik D., Logue, Jennifer K., Aguilar, Melissa S., Shuey, Kiel, Loos, Carolin, Yu, Jingyou, Franko, Nicholas, Choi, Robert Y., Wald, Anna, Barouch, Dan, Koelle, David M., Lauffenburger, Douglas, Chu, Helen Y., Alter, Galit, Seshadri, Chetan
Published 2021

Correlates of protection against SARS-CoV-2 in rhesus macaques

by McMahan, Katherine, Yu, Jingyou, Mercado, Noe B., Loos, Carolin, Tostanoski, Lisa H., Chandrashekar, Abishek, Liu, Jinyan, Peter, Lauren, Atyeo, Caroline, Zhu, Alex Lee, Bondzie, Esther A., Dagotto, Gabriel, Gebre, Makda S., Jacob-Dolan, Catherine, Li, Zhenfeng, Nampanya, Felix, Patel, Shivani, Pessaint, Laurent, Van Ry, Alex, Blade, Kelvin, Yalley-Ogunro, Jake, Cabus, Mehtap, Brown, Renita, Cook, Anthony, Teow, Elyse, Andersen, Hanne, Lewis, Mark G., Lauffenburger, Douglas A, Alter, Galit, Barouch, Dan H.
Published 2021

Determining the Phagocytic Activity of Clinical Antibody Samples

by McAndrew, Elizabeth G., Dugast, Anne-Sophie, Licht, Anna F., Eusebio, Justin R., Alter, Galit, Ackerman, Margaret E.
Published 2014

Machine Learning Methods Enable Predictive Modeling of Antibody Feature:Function Relationships in RV144 Vaccinees

by Choi, Ickwon, Chung, Amy W., Suscovich, Todd J., Rerks-Ngarm, Supachai, Pitisuttithum, Punnee, Nitayaphan, Sorachai, Kaewkungwal, Jaranit, O'Connell, Robert J., Francis, Donald, Robb, Merlin L., Michael, Nelson L., Kim, Jerome H., Alter, Galit, Ackerman, Margaret E., Bailey-Kellogg, Chris
Published 2015

The Molecular Origin and Consequences of Escape from miRNA Regulation by HLA-C Alleles

by O'hUigin, Colm, Kulkarni, Smita, Xu, Yunping, Deng, Zhihui, Kidd, Judith, Kidd, Kenneth, Gao, Xiaojiang, Carrington, Mary
Published 2011

Selection of an HLA-C*03:04-Restricted HIV-1 p24 Gag Sequence Variant Is Associated with Viral Escape from KIR2DL3+ Natural Killer Cells: Data from an Observational Cohort in South...

by Thobakgale, Christina F., Jimenez Cruz, Camilo A., Garcia-Beltran, Wilfredo F., Carlson, Jonathan M., van Teijlingen, Nienke H., Mann, Jaclyn K., Jaggernath, Manjeetha, Kang, Seung-gu, Chung, Amy W., Schafer, Jamie L., Evans, David T., Alter, Galit, Walker, Bruce D., Goulder, Philip J., Carrington, Mary, Hartmann, Pia, Pertel, Thomas, Zhou, Ruhong, Ndung'u, Thumbi, Altfeld, Marcus, Holzemer, Angelique, Korner, Christian
Published 2016

KIR2DS4 Promotes HIV-1 Pathogenesis: New Evidence from Analyses of Immunogenetic Data and Natural Killer Cell Function

by Merino, Aimee M., Dugast, Anne-Sophie, Wilson, Craig M., Goepfert, Paul A., Alter, Galit, Kaslow, Richard A., Tang, Jianming
Published 2014

Chronic HCV Infection Affects the NK Cell Phenotype in the Blood More than in the Liver

by Cosgrove, Cormac, Berger, Christoph T., Kroy, Daniela C., Cheney, Patrick C., Ghebremichael, Musie, Aneja, Jasneet, Tomlinson, Michelle, Kim, Arthur Y., Lauer, Georg M., Alter, Galit
Published 2014

Characterization of anti-HIV-1 neutralizing and binding antibodies in chronic HIV-1 subtype C infection

by Archary, Derseree, Rong, Rong, Gordon, Michelle L., Boliar, Saikat, Madiga, Maphuti, Gray, Elin S., Dugast, Anne-Sophie, Hermanus, Tandile, Goulder, Philip J. R., Coovadia, Hoosen M., Werner, Lise, Morris, Lynn, Alter, Galit, Derdeyn, Cynthia A., Ndung'u, Thumbi
Published 2014

Large pseudocounts and L[subscript 2]-norm penalties are necessary for the mean-field inference of Ising and Potts models

by Cocco, S., De Leonardis, E., Monasson, R., Barton, John P.
Published 2015

CXCL13 is a plasma biomarker of germinal center activity

by Havenar-Daughton, Colin, Lindqvist, Madelene, Heit, Antje, Wu, Jennifer E., Reiss, Samantha M., Kendric, Kayla, Bélanger, Simon, Kasturi, Sudhir Pai, Landais, Elise, Akondy, Rama S., McGuire, Helen M., Bothwell, Marcella, Vagefi, Parsia A., Scully, Eileen, Tomaras, Georgia D., Davis, Mark M., Poignard, Pascal, Ahmed, Rafi, Walker, Bruce D., Pulendran, Bali, McElrath, M. Juliana, Kaufmann, Daniel E., Crotty, Shane
Published 2017