Polycystic Ovary Syndrome Susceptibility Loci Inform Disease Etiological Heterogeneity

Polycystic ovary syndrome (PCOS) is a complex disorder with heterogenous phenotypes and unclear etiology. A recent phenotypic clustering study identified metabolic and reproductive subtypes of PCOS. We hypothesize that the heterogeneity of PCOS manifestations reflects different mechanistic pathways...

Full description

Bibliographic Details
Main Authors: Yanfei Zhang, Vani C. Movva, Marc S. Williams, Ming Ta Michael Lee
Format: Article
Language:English
Published: MDPI AG 2021-06-01
Series:Journal of Clinical Medicine
Subjects:
Online Access:https://www.mdpi.com/2077-0383/10/12/2688
id doaj-01119728ffbe4ac18a6afefb8098afb8
record_format Article
spelling doaj-01119728ffbe4ac18a6afefb8098afb82021-07-01T00:30:37ZengMDPI AGJournal of Clinical Medicine2077-03832021-06-01102688268810.3390/jcm10122688Polycystic Ovary Syndrome Susceptibility Loci Inform Disease Etiological HeterogeneityYanfei Zhang0Vani C. Movva1Marc S. Williams2Ming Ta Michael Lee3Genomic Medicine Institute, Geisinger, Danville, PA 17822, USADepartment of Obstetrics and Gynecology, Geisinger Medical Center, Danville, PA 17822, USAGenomic Medicine Institute, Geisinger, Danville, PA 17822, USAGenomic Medicine Institute, Geisinger, Danville, PA 17822, USAPolycystic ovary syndrome (PCOS) is a complex disorder with heterogenous phenotypes and unclear etiology. A recent phenotypic clustering study identified metabolic and reproductive subtypes of PCOS. We hypothesize that the heterogeneity of PCOS manifestations reflects different mechanistic pathways and can be identified using a genetic approach. We applied k-means clustering to categorize the genome-wide significant PCOS variants into clusters based on their associations with selected quantitative traits that likely reflect PCOS etiological pathways. We evaluated the association of each cluster with PCOS-related traits and disease outcomes. We then applied Mendelian randomization to estimate the causal effects between the traits and PCOS. Three categories of variants were identified: adiposity, insulin resistant, and reproductive. Significant associations were observed for variants in the adiposity cluster with body mass index (BMI), waist circumference and breast cancer, and variants in the insulin-resistant cluster with fasting insulin, glucose values, and homeostatic model assessment of insulin resistance (HOMA-IR). Sex hormone binding globulin (SHBG) has strong association with all three clusters. Mendelian randomization suggested a causal role of BMI and SHBG on PCOS. No causal associations were observed for PCOS on disease outcomes.https://www.mdpi.com/2077-0383/10/12/2688polycystic ovary syndromeclusteringgenetic heterogeneityadiposityinsulin resistanceMendelian randomization
collection DOAJ
language English
format Article
sources DOAJ
author Yanfei Zhang
Vani C. Movva
Marc S. Williams
Ming Ta Michael Lee
spellingShingle Yanfei Zhang
Vani C. Movva
Marc S. Williams
Ming Ta Michael Lee
Polycystic Ovary Syndrome Susceptibility Loci Inform Disease Etiological Heterogeneity
Journal of Clinical Medicine
polycystic ovary syndrome
clustering
genetic heterogeneity
adiposity
insulin resistance
Mendelian randomization
author_facet Yanfei Zhang
Vani C. Movva
Marc S. Williams
Ming Ta Michael Lee
author_sort Yanfei Zhang
title Polycystic Ovary Syndrome Susceptibility Loci Inform Disease Etiological Heterogeneity
title_short Polycystic Ovary Syndrome Susceptibility Loci Inform Disease Etiological Heterogeneity
title_full Polycystic Ovary Syndrome Susceptibility Loci Inform Disease Etiological Heterogeneity
title_fullStr Polycystic Ovary Syndrome Susceptibility Loci Inform Disease Etiological Heterogeneity
title_full_unstemmed Polycystic Ovary Syndrome Susceptibility Loci Inform Disease Etiological Heterogeneity
title_sort polycystic ovary syndrome susceptibility loci inform disease etiological heterogeneity
publisher MDPI AG
series Journal of Clinical Medicine
issn 2077-0383
publishDate 2021-06-01
description Polycystic ovary syndrome (PCOS) is a complex disorder with heterogenous phenotypes and unclear etiology. A recent phenotypic clustering study identified metabolic and reproductive subtypes of PCOS. We hypothesize that the heterogeneity of PCOS manifestations reflects different mechanistic pathways and can be identified using a genetic approach. We applied k-means clustering to categorize the genome-wide significant PCOS variants into clusters based on their associations with selected quantitative traits that likely reflect PCOS etiological pathways. We evaluated the association of each cluster with PCOS-related traits and disease outcomes. We then applied Mendelian randomization to estimate the causal effects between the traits and PCOS. Three categories of variants were identified: adiposity, insulin resistant, and reproductive. Significant associations were observed for variants in the adiposity cluster with body mass index (BMI), waist circumference and breast cancer, and variants in the insulin-resistant cluster with fasting insulin, glucose values, and homeostatic model assessment of insulin resistance (HOMA-IR). Sex hormone binding globulin (SHBG) has strong association with all three clusters. Mendelian randomization suggested a causal role of BMI and SHBG on PCOS. No causal associations were observed for PCOS on disease outcomes.
topic polycystic ovary syndrome
clustering
genetic heterogeneity
adiposity
insulin resistance
Mendelian randomization
url https://www.mdpi.com/2077-0383/10/12/2688
work_keys_str_mv AT yanfeizhang polycysticovarysyndromesusceptibilitylociinformdiseaseetiologicalheterogeneity
AT vanicmovva polycysticovarysyndromesusceptibilitylociinformdiseaseetiologicalheterogeneity
AT marcswilliams polycysticovarysyndromesusceptibilitylociinformdiseaseetiologicalheterogeneity
AT mingtamichaellee polycysticovarysyndromesusceptibilitylociinformdiseaseetiologicalheterogeneity
_version_ 1721348347900461056