Antimicrobial resistance of pathogens causing community-acquired urinary tract infections in Russia: results of the multicenter study “DARMIS-2018”

Objective. To study in vitro activity of antimicrobials against clinical isolates from patients with communityacquired urinary tract infections (UTIs) in different regions of Russia in 2017–2018. Materials and Methods. A total of 1052 Enterobacterales isolates collected in the Russian Federation...

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Main Authors: Palagin I.S., Sukhorukova M.V., Dekhnich A.V., Edelstein M.V., Perepanova T.S., Kozlov R.S., “DARMIS-2018” Study Group
Format: Article
Language:Russian
Published: Interregional Association for Clinical Microbiology and Antimicrobial Chemotherapy 2019-10-01
Series:Клиническая микробиология и антимикробная химиотерапия
Subjects:
Online Access:https://cmac-journal.ru/publication/2019/2/cmac-2019-t21-n2-p134/cmac-2019-t21-n2-p134.pdf
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author Palagin I.S.
Sukhorukova M.V.
Dekhnich A.V.
Edelstein M.V.
Perepanova T.S.
Kozlov R.S.
“DARMIS-2018” Study Group
spellingShingle Palagin I.S.
Sukhorukova M.V.
Dekhnich A.V.
Edelstein M.V.
Perepanova T.S.
Kozlov R.S.
“DARMIS-2018” Study Group
Antimicrobial resistance of pathogens causing community-acquired urinary tract infections in Russia: results of the multicenter study “DARMIS-2018”
Клиническая микробиология и антимикробная химиотерапия
community-acquired urinary tract infections
uropathogens
escherichia coli
antimicrobial resistance
author_facet Palagin I.S.
Sukhorukova M.V.
Dekhnich A.V.
Edelstein M.V.
Perepanova T.S.
Kozlov R.S.
“DARMIS-2018” Study Group
author_sort Palagin I.S.
title Antimicrobial resistance of pathogens causing community-acquired urinary tract infections in Russia: results of the multicenter study “DARMIS-2018”
title_short Antimicrobial resistance of pathogens causing community-acquired urinary tract infections in Russia: results of the multicenter study “DARMIS-2018”
title_full Antimicrobial resistance of pathogens causing community-acquired urinary tract infections in Russia: results of the multicenter study “DARMIS-2018”
title_fullStr Antimicrobial resistance of pathogens causing community-acquired urinary tract infections in Russia: results of the multicenter study “DARMIS-2018”
title_full_unstemmed Antimicrobial resistance of pathogens causing community-acquired urinary tract infections in Russia: results of the multicenter study “DARMIS-2018”
title_sort antimicrobial resistance of pathogens causing community-acquired urinary tract infections in russia: results of the multicenter study “darmis-2018”
publisher Interregional Association for Clinical Microbiology and Antimicrobial Chemotherapy
series Клиническая микробиология и антимикробная химиотерапия
issn 1684-4386
2686-9586
publishDate 2019-10-01
description Objective. To study in vitro activity of antimicrobials against clinical isolates from patients with communityacquired urinary tract infections (UTIs) in different regions of Russia in 2017–2018. Materials and Methods. A total of 1052 Enterobacterales isolates collected in the Russian Federation as part of a multicenter, prospective, epidemiological study of the antimicrobial resistance of uropathogens causing community-acquired UTI in different subsets of patients (“DARMIS-2018”) were included in the analysis. Uropathogens were isolated from children and adults of both sexes in all age groups with acute (and recurrences of chronic) community-acquired UTIs, including pregnant women with asymptomatic bacteriuria in 32 centers of 24 cities of Russia in 2017–2018. Results. Enterobacterales comprised a total of 90.6% of all isolated bacterial pathogens (90.6% in the adult subset; 89.3% in the pregnant women subset and 93.8% in the children and adolescents subset). The most prevalent species were Escherichia coli (71.3% in the adult subset; 73.6% in the pregnant women subset; 79.7% in the children and adolescents subset) and Klebsiella pneumoniae (11.7% in the adult subset; 10.4% in the pregnant women subset; 7.8% in the children and adolescents subset). The highest activity against E. coli among the oral antimicrobials was demonstrated for fosfomycin (97.7% in the adult subset; 95.9% in the pregnant women subset; 99.0% in the children and adolescents subset) and nitrofurantoin (98.1% in adult subset; 100% in the pregnant women subset; 97.1% in the children and adolescents subset). Among the parenteral antimicrobials, meropenem and amikacin showed the highest activity (99.4% and 97.9% in the adult subset; 99.5% and 99.1% in the pregnant women subset; 100% and 97.1% in the children and adolescents subset, respectively). Ampicillin, amoxicillin/clavulanic acid and trimethoprim/sulfamethoxazole demonstrated the lowest in vitro activity against E. coli (less than 80% per each patient subset). The susceptibility of E. coli isolates to ciprofloxacin was 60.6% in the adult subset; 80.0% in the pregnant women subset and 80.4% in the children and adolescents subset. The rates of extended spectrum beta-lactamase production based on the results of phenotypic tests were 27.0% in the adult subset; 8.6% in the pregnant women subset and 23.5% in the children and adolescents subset. Conclusions. Results of this study indicated the increase in resistance of community-acquired isolates of Enterobacterales (particularly E. coli) to the most of antimicrobials in Russia.
topic community-acquired urinary tract infections
uropathogens
escherichia coli
antimicrobial resistance
url https://cmac-journal.ru/publication/2019/2/cmac-2019-t21-n2-p134/cmac-2019-t21-n2-p134.pdf
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spelling doaj-03c96680e69f460199162bbcbc9632b32020-11-25T01:18:44ZrusInterregional Association for Clinical Microbiology and Antimicrobial ChemotherapyКлиническая микробиология и антимикробная химиотерапия1684-43862686-95862019-10-0121213414610.36488/cmac.2019.2.134-146cmac-2019-t21-n2-p134Antimicrobial resistance of pathogens causing community-acquired urinary tract infections in Russia: results of the multicenter study “DARMIS-2018”Palagin I.S.0Sukhorukova M.V.1Dekhnich A.V.2Edelstein M.V.3Perepanova T.S.4Kozlov R.S.5“DARMIS-2018” Study Group6Smolensk State Medical University, Smolensk, RussiaInstitute of Antimicrobial Chemotherapy, Smolensk, RussiaInstitute of Antimicrobial Chemotherapy, Smolensk, RussiaInstitute of Antimicrobial Chemotherapy, Smolensk, RussiaInstitute of Urology and Interventional Radiology named after N.A. Lopatkin, Moscow, RussiaInstitute of Antimicrobial Chemotherapy, Smolensk, RussiaMutin M.YU. (OGAUZ «BGB№1», Bratsk), Strebkova V.V. (BUZ VO «VGKBSMTP №10», Voronezh), Amineva P.G. (OOO «Kvoliti Med», Ekaterinburg), Vetohina A.V. (GBUZ «IOKB», Irkutsk), Suhoreva M.V. (OGAUZ «GIMDKB», Irkutsk), Ivanova I.A. (GBU RME «RCPB SPID i IZ», Joshkar-Ola), Valiullina I.R. (GAUZ «RKB MZ RT», Kazan'), CHastoedova A.N. (KOGBUZ «KOKB», Kirov), SHirokova T.M. (KOGBUZ «KOKPC», Kirov), Varibrus E.V. (GBUZ «KKB№2» MZ KK, Krasnodar), Vasil'eva I.R. (BU HMAO-YUgry «NOKDB», Nizhnevartovsk), Domanskaya O.V. (GBUZ KO «NGDKB№4», Novokuzneck), Bekker G.G. (NUZ «DKB na st. Novosibirsk-Gl.» OAO «RZHD», Novosibirsk), Kul'chavenya E.V. (FGBU «NNIIT» Minzdrava Rossii, FGBOU VO «NGMU» Minzdrava Rossii, Novosibirsk), Plugin P.S. (GBUZ NO «GKBSMP№2», Novosibirsk), Popova L.D. (BUZ OO «OKB», Omsk), Elohina E.V. (BUZ OO «OKB», FGBOU VO «OmGMU» Minzdrava Rossii, Omsk), Kogan M.I., Naboka YU.L. (FGBOU VO «RostGMU» Minzdrava Rossii, Rostov-na-Donu), ZHestkov A.V., Lyamin A.V. (FGBOU VO «SamGMU» Minzdrava Rossii,Samara), Husnutdinova T.A., SHipicyna E.V. (FGBU «NII AGiR im. D.O. Otta», FGBOU VO «SPbGPMU» Minzdrava Rossii, Sankt-Peterburg),Bulkin A.N. (SPbGBUZ «GB Svyatogo Velikomuchenika Georgiya», Sankt-Peterburg), Moskvitina E.N. (FGBU SibFNKC FMBA Rossii, Seversk),Nikiforovskaya N.N. (NUZ OB na st. Smolensk OAO «RZHD», Smolensk), Malev I.V. (OBGUZ «Poliklinika №3», Smolensk), Varganova A.N.(BU «SOKB», Surgut), Mart'yanova N.M. (GBUZ SO «TGKB№5», Tol'yatti), Bykonya S.A., Volkovskaya I.V. (OGAUZ «TOKB», Tomsk), MalyavinA.I., Sidorova R.K. (GUZ «GP№4», Ul'yanovsk), Hajdarshina N.E. (FGBOU VO «CHelGU», CHelyabinsk), SHamaeva S.H., Portnyagina U.S. (GBU RS(YA) «RB№2-CEMP», YAkutsk), Ershova M.G. (GBUZ YAO «IKB», YAroslavl')Objective. To study in vitro activity of antimicrobials against clinical isolates from patients with communityacquired urinary tract infections (UTIs) in different regions of Russia in 2017–2018. Materials and Methods. A total of 1052 Enterobacterales isolates collected in the Russian Federation as part of a multicenter, prospective, epidemiological study of the antimicrobial resistance of uropathogens causing community-acquired UTI in different subsets of patients (“DARMIS-2018”) were included in the analysis. Uropathogens were isolated from children and adults of both sexes in all age groups with acute (and recurrences of chronic) community-acquired UTIs, including pregnant women with asymptomatic bacteriuria in 32 centers of 24 cities of Russia in 2017–2018. Results. Enterobacterales comprised a total of 90.6% of all isolated bacterial pathogens (90.6% in the adult subset; 89.3% in the pregnant women subset and 93.8% in the children and adolescents subset). The most prevalent species were Escherichia coli (71.3% in the adult subset; 73.6% in the pregnant women subset; 79.7% in the children and adolescents subset) and Klebsiella pneumoniae (11.7% in the adult subset; 10.4% in the pregnant women subset; 7.8% in the children and adolescents subset). The highest activity against E. coli among the oral antimicrobials was demonstrated for fosfomycin (97.7% in the adult subset; 95.9% in the pregnant women subset; 99.0% in the children and adolescents subset) and nitrofurantoin (98.1% in adult subset; 100% in the pregnant women subset; 97.1% in the children and adolescents subset). Among the parenteral antimicrobials, meropenem and amikacin showed the highest activity (99.4% and 97.9% in the adult subset; 99.5% and 99.1% in the pregnant women subset; 100% and 97.1% in the children and adolescents subset, respectively). Ampicillin, amoxicillin/clavulanic acid and trimethoprim/sulfamethoxazole demonstrated the lowest in vitro activity against E. coli (less than 80% per each patient subset). The susceptibility of E. coli isolates to ciprofloxacin was 60.6% in the adult subset; 80.0% in the pregnant women subset and 80.4% in the children and adolescents subset. The rates of extended spectrum beta-lactamase production based on the results of phenotypic tests were 27.0% in the adult subset; 8.6% in the pregnant women subset and 23.5% in the children and adolescents subset. Conclusions. Results of this study indicated the increase in resistance of community-acquired isolates of Enterobacterales (particularly E. coli) to the most of antimicrobials in Russia.https://cmac-journal.ru/publication/2019/2/cmac-2019-t21-n2-p134/cmac-2019-t21-n2-p134.pdfcommunity-acquired urinary tract infectionsuropathogensescherichia coliantimicrobial resistance