Analysis of ancient mtDNA from the medieval archeological site of Amiternum (L'Aquila), central Italy

• Main Authors: Anna Poma, Patrizia Cesare, Antonella Bonfigli, Giulia Vecchiotti, Sabrina Colafarina, Francesca Savini, Fabio Redi, Osvaldo Zarivi
• Format: Article
• Language: English
• Published: Elsevier 2019-10-01
• Series: Heliyon
• Subjects: Genetics; DNA sequencing; Mutation; Phylogeny; Archeology; Ancient DNA
• Online Access: http://www.sciencedirect.com/science/article/pii/S2405844019362462

Study of ancient DNA makes it possible to analyze genetic relationships between individuals and populations of past and present. In this paper we have analyzed remains of human bones, dating back to the 8th-10th century AD, from the burials found in the Cathedral of Santa Maria in Civitate, archaeological site of Amiternum, L'Aquila, Italy. As a genetic marker, the hypervariable region 1 of mitochondrial DNA (HVR1) was selected. To obtain reliable sequences from the hypervariable region 1 of mtDNA (HVR1) were performed: multiple extractions, template quantification and cloning of PCR products. The sequences obtained were compared with Anderson's sequence for the identification of polymorphisms (SNP) and haplogroups. The data obtained were analyzed with various software and phylogenetic methods. For the comparison between populations, ancient and modern sequences found in databases and literature have been used. This work provides preliminary information on the correlation between the population of Amiternum, the migrant populations transited and/or established in the territory of Amiternum such as Byzantines, Longobards (Lombards), which dominated the Italian peninsula between 568 and 774 AD, and the current populations of Italy.The study of haplogroups, the analysis of genetic variability and phylogenesis studies on the sequences considered show a genetic closeness between the individuals of Amiternum, the current population of central-northern Italy and the Germanic tribe of Longobards, however, also highlights genetic traits of Byzantines in some samples of Amiternum. Using the analysis of amelogenin gene fragments, we successfully determined the sex of the bone remains on all samples.