KERAGAMAN GEN CALPASTATIN, CALPAIN 3 DAN MYOSTATIN PADA DOMBA DI UP3 JONGGOL
The aim of this study was to identify the genetic polymorphisms of calpastatin (CAST), calpain 3 (CAPN3) and myostatin (MSTN) on local sheep at Jonggol Animal Science Teaching and Research Unit (JASTRU). A total number of 294 blood samples were collected from JASTRU. The identification of polymorhis...
Main Authors: | , , , , , |
---|---|
Format: | Article |
Language: | English |
Published: |
Bogor Agricultural University
2012-04-01
|
Series: | Jurnal Ilmu Pertanian Indonesia |
Subjects: | |
Online Access: | http://journal.ipb.ac.id/index.php/JIPI/article/view/10165 |
id |
doaj-04bfbd9d899b49288588f36c157873f9 |
---|---|
record_format |
Article |
spelling |
doaj-04bfbd9d899b49288588f36c157873f92020-11-24T23:16:20ZengBogor Agricultural UniversityJurnal Ilmu Pertanian Indonesia0853-42172443-34622012-04-0117117KERAGAMAN GEN CALPASTATIN, CALPAIN 3 DAN MYOSTATIN PADA DOMBA DI UP3 JONGGOLCece Sumantri0Jakaria1Mohamad Yamin2Henny Nuraini3Bramada Winiar Putra4Eryk Andreas5Departemen Ilmu Produksi dan Teknologi Peternakan, Fakultas Peternakan, Institut Pertanian Bogor, Kampus IPB Darmaga, Bogor 16680Departemen Ilmu Produksi dan Teknologi Peternakan, Fakultas Peternakan, Institut Pertanian Bogor, Kampus IPB Darmaga, Bogor 16680Departemen Ilmu Produksi dan Teknologi Peternakan, Fakultas Peternakan, Institut Pertanian Bogor, Kampus IPB Darmaga, Bogor 16680Departemen Ilmu Produksi dan Teknologi Peternakan, Fakultas Peternakan, Institut Pertanian Bogor, Kampus IPB Darmaga, Bogor 16680Departemen Ilmu Produksi dan Teknologi Peternakan, Fakultas Peternakan, Institut Pertanian Bogor, Kampus IPB Darmaga, Bogor 16680Departemen Ilmu Produksi dan Teknologi Peternakan, Fakultas Peternakan, Institut Pertanian Bogor, Kampus IPB Darmaga, Bogor 16680The aim of this study was to identify the genetic polymorphisms of calpastatin (CAST), calpain 3 (CAPN3) and myostatin (MSTN) on local sheep at Jonggol Animal Science Teaching and Research Unit (JASTRU). A total number of 294 blood samples were collected from JASTRU. The identification of polymorhism in CAST and CAPN3 genes performed by using Polymerase Chain Reaction-Restriction Fragment Length Polymorphism (PCR-RFLP) while MSTN gene by using PCR-SSCP methods. The results showed that CAST|MspI, CAST|NcoI and CAPN3|MaeII loci were polymorphic, whereas The MSTN locus was monomorphic for G (1.0). The frequency of allele M (0.87) on the locus (CAST|MspI) higher than the N allele (0.13). At locus CAST|NcoI, the frequency of allele M (0.96) higher than the N allele (0.04). At the CAPN3|MaeII, allele G (0.85) and allele T (0.15). Locus CAST|NcoI has higher observed heterozygosity (Ho = 0.92) compared to CAPN3|MaeII and CAST|MspI (Ho = 0.74-0.77), however has lower compared to CAPN3|MaeII and CAST|MspI in expected of heterozygosity (He = 0.08 vs 0.23-0.26) and in index fixation (Fis = -0.04 vs 0.03-0.12).http://journal.ipb.ac.id/index.php/JIPI/article/view/10165Genetic polymorphismcalpastatincalpainmyostatin and sheep |
collection |
DOAJ |
language |
English |
format |
Article |
sources |
DOAJ |
author |
Cece Sumantri Jakaria Mohamad Yamin Henny Nuraini Bramada Winiar Putra Eryk Andreas |
spellingShingle |
Cece Sumantri Jakaria Mohamad Yamin Henny Nuraini Bramada Winiar Putra Eryk Andreas KERAGAMAN GEN CALPASTATIN, CALPAIN 3 DAN MYOSTATIN PADA DOMBA DI UP3 JONGGOL Jurnal Ilmu Pertanian Indonesia Genetic polymorphism calpastatin calpain myostatin and sheep |
author_facet |
Cece Sumantri Jakaria Mohamad Yamin Henny Nuraini Bramada Winiar Putra Eryk Andreas |
author_sort |
Cece Sumantri |
title |
KERAGAMAN GEN CALPASTATIN, CALPAIN 3 DAN MYOSTATIN PADA DOMBA DI UP3 JONGGOL |
title_short |
KERAGAMAN GEN CALPASTATIN, CALPAIN 3 DAN MYOSTATIN PADA DOMBA DI UP3 JONGGOL |
title_full |
KERAGAMAN GEN CALPASTATIN, CALPAIN 3 DAN MYOSTATIN PADA DOMBA DI UP3 JONGGOL |
title_fullStr |
KERAGAMAN GEN CALPASTATIN, CALPAIN 3 DAN MYOSTATIN PADA DOMBA DI UP3 JONGGOL |
title_full_unstemmed |
KERAGAMAN GEN CALPASTATIN, CALPAIN 3 DAN MYOSTATIN PADA DOMBA DI UP3 JONGGOL |
title_sort |
keragaman gen calpastatin, calpain 3 dan myostatin pada domba di up3 jonggol |
publisher |
Bogor Agricultural University |
series |
Jurnal Ilmu Pertanian Indonesia |
issn |
0853-4217 2443-3462 |
publishDate |
2012-04-01 |
description |
The aim of this study was to identify the genetic polymorphisms of calpastatin (CAST), calpain 3 (CAPN3) and myostatin (MSTN) on local sheep at Jonggol Animal Science Teaching and Research Unit (JASTRU). A total number of 294 blood samples were collected from JASTRU. The identification of polymorhism in CAST and CAPN3 genes performed by using Polymerase Chain Reaction-Restriction Fragment Length Polymorphism (PCR-RFLP) while MSTN gene by using PCR-SSCP methods. The results showed that CAST|MspI, CAST|NcoI and CAPN3|MaeII loci were polymorphic, whereas The MSTN locus was monomorphic for G (1.0). The frequency of allele M (0.87) on the locus (CAST|MspI) higher than the N allele (0.13). At locus CAST|NcoI, the frequency of allele M (0.96) higher than the N allele (0.04). At the CAPN3|MaeII, allele G (0.85) and allele T (0.15). Locus CAST|NcoI has higher observed heterozygosity (Ho = 0.92) compared to CAPN3|MaeII and CAST|MspI (Ho = 0.74-0.77), however has lower compared to CAPN3|MaeII and CAST|MspI in expected of heterozygosity (He = 0.08 vs 0.23-0.26) and in index fixation (Fis = -0.04 vs 0.03-0.12). |
topic |
Genetic polymorphism calpastatin calpain myostatin and sheep |
url |
http://journal.ipb.ac.id/index.php/JIPI/article/view/10165 |
work_keys_str_mv |
AT cecesumantri keragamangencalpastatincalpain3danmyostatinpadadombadiup3jonggol AT jakaria keragamangencalpastatincalpain3danmyostatinpadadombadiup3jonggol AT mohamadyamin keragamangencalpastatincalpain3danmyostatinpadadombadiup3jonggol AT hennynuraini keragamangencalpastatincalpain3danmyostatinpadadombadiup3jonggol AT bramadawiniarputra keragamangencalpastatincalpain3danmyostatinpadadombadiup3jonggol AT erykandreas keragamangencalpastatincalpain3danmyostatinpadadombadiup3jonggol |
_version_ |
1725587508897513472 |