Diversity and Regulation of S-Adenosylmethionine Dependent Methyltransferases in the Anhydrobiotic Midge

Multiple co-localized paralogs of genes in <i>Polypedilum vanderplanki’s</i> genome have strong transcriptional response to dehydration and considered to be a part of adaptation machinery at the larvae stage. One group of such genes represented by L-isoaspartate O-methyltransferases (PIM...

Full description

Bibliographic Details
Main Authors: Ruslan Deviatiiarov, Rustam Ayupov, Alexander Laikov, Elena Shagimardanova, Takahiro Kikawada, Oleg Gusev
Format: Article
Language:English
Published: MDPI AG 2020-09-01
Series:Insects
Subjects:
Online Access:https://www.mdpi.com/2075-4450/11/9/634
id doaj-06741cdc44214a798a5246d475680799
record_format Article
spelling doaj-06741cdc44214a798a5246d4756807992020-11-25T03:28:48ZengMDPI AGInsects2075-44502020-09-011163463410.3390/insects11090634Diversity and Regulation of S-Adenosylmethionine Dependent Methyltransferases in the Anhydrobiotic MidgeRuslan Deviatiiarov0Rustam Ayupov1Alexander Laikov2Elena Shagimardanova3Takahiro Kikawada4Oleg Gusev5Institute of Fundamental Medicine and Biology, Kazan Federal University, Kazan, Tatarstan 420008, RussiaDepartment of Cell Biology, SUNY Downstate Health Sciences University, Brooklyn, NY 11203, USAInstitute of Fundamental Medicine and Biology, Kazan Federal University, Kazan, Tatarstan 420008, RussiaInstitute of Fundamental Medicine and Biology, Kazan Federal University, Kazan, Tatarstan 420008, RussiaAnhydrobiosis Research Group, Molecular Biomimetics Research Unit, Institute of Agrobiological Sciences, National Institute of Agriculture and Food Research Organization (NARO), Tsukuba 305-0851, JapanInstitute of Fundamental Medicine and Biology, Kazan Federal University, Kazan, Tatarstan 420008, RussiaMultiple co-localized paralogs of genes in <i>Polypedilum vanderplanki’s</i> genome have strong transcriptional response to dehydration and considered to be a part of adaptation machinery at the larvae stage. One group of such genes represented by L-isoaspartate O-methyltransferases (PIMT). In order to highlight specific role of PIMT paralogization in desiccation tolerance of the larvae we annotated and compared S-adenosylmethionine (SAM) dependent methyltransferases of four insect species. From another side we applied co-expression analysis in desiccation/rehydration time course and showed that PIMT coding genes could be separated into five clusters by expression profile. We found that among <i>Polypedilum vanderplanki’s</i> PIMTs only PIMT1 and PIMT2 have enzymatic activity in normal physiological conditions. From in silico analysis of the protein structures we found two highly variable regions outside of the active center, but also amino acid substitutions which may affect SAM stabilization. Overall, in this study we demonstrated features of <i>Polypedilum vanderplanki’s</i> PIMT coding paralogs related to different roles in desiccation tolerance of the larvae. Our results also suggest a role of different SAM-methyltransferases in the adaptation, including GSMT, JHAMT, and candidates from other classes, which could be considered in future studies.https://www.mdpi.com/2075-4450/11/9/634SAM-dependent methyltransferasesPIMT<i>Polypedilum vanderplanki</i>anhydrobiosistranscriptomics
collection DOAJ
language English
format Article
sources DOAJ
author Ruslan Deviatiiarov
Rustam Ayupov
Alexander Laikov
Elena Shagimardanova
Takahiro Kikawada
Oleg Gusev
spellingShingle Ruslan Deviatiiarov
Rustam Ayupov
Alexander Laikov
Elena Shagimardanova
Takahiro Kikawada
Oleg Gusev
Diversity and Regulation of S-Adenosylmethionine Dependent Methyltransferases in the Anhydrobiotic Midge
Insects
SAM-dependent methyltransferases
PIMT
<i>Polypedilum vanderplanki</i>
anhydrobiosis
transcriptomics
author_facet Ruslan Deviatiiarov
Rustam Ayupov
Alexander Laikov
Elena Shagimardanova
Takahiro Kikawada
Oleg Gusev
author_sort Ruslan Deviatiiarov
title Diversity and Regulation of S-Adenosylmethionine Dependent Methyltransferases in the Anhydrobiotic Midge
title_short Diversity and Regulation of S-Adenosylmethionine Dependent Methyltransferases in the Anhydrobiotic Midge
title_full Diversity and Regulation of S-Adenosylmethionine Dependent Methyltransferases in the Anhydrobiotic Midge
title_fullStr Diversity and Regulation of S-Adenosylmethionine Dependent Methyltransferases in the Anhydrobiotic Midge
title_full_unstemmed Diversity and Regulation of S-Adenosylmethionine Dependent Methyltransferases in the Anhydrobiotic Midge
title_sort diversity and regulation of s-adenosylmethionine dependent methyltransferases in the anhydrobiotic midge
publisher MDPI AG
series Insects
issn 2075-4450
publishDate 2020-09-01
description Multiple co-localized paralogs of genes in <i>Polypedilum vanderplanki’s</i> genome have strong transcriptional response to dehydration and considered to be a part of adaptation machinery at the larvae stage. One group of such genes represented by L-isoaspartate O-methyltransferases (PIMT). In order to highlight specific role of PIMT paralogization in desiccation tolerance of the larvae we annotated and compared S-adenosylmethionine (SAM) dependent methyltransferases of four insect species. From another side we applied co-expression analysis in desiccation/rehydration time course and showed that PIMT coding genes could be separated into five clusters by expression profile. We found that among <i>Polypedilum vanderplanki’s</i> PIMTs only PIMT1 and PIMT2 have enzymatic activity in normal physiological conditions. From in silico analysis of the protein structures we found two highly variable regions outside of the active center, but also amino acid substitutions which may affect SAM stabilization. Overall, in this study we demonstrated features of <i>Polypedilum vanderplanki’s</i> PIMT coding paralogs related to different roles in desiccation tolerance of the larvae. Our results also suggest a role of different SAM-methyltransferases in the adaptation, including GSMT, JHAMT, and candidates from other classes, which could be considered in future studies.
topic SAM-dependent methyltransferases
PIMT
<i>Polypedilum vanderplanki</i>
anhydrobiosis
transcriptomics
url https://www.mdpi.com/2075-4450/11/9/634
work_keys_str_mv AT ruslandeviatiiarov diversityandregulationofsadenosylmethioninedependentmethyltransferasesintheanhydrobioticmidge
AT rustamayupov diversityandregulationofsadenosylmethioninedependentmethyltransferasesintheanhydrobioticmidge
AT alexanderlaikov diversityandregulationofsadenosylmethioninedependentmethyltransferasesintheanhydrobioticmidge
AT elenashagimardanova diversityandregulationofsadenosylmethioninedependentmethyltransferasesintheanhydrobioticmidge
AT takahirokikawada diversityandregulationofsadenosylmethioninedependentmethyltransferasesintheanhydrobioticmidge
AT oleggusev diversityandregulationofsadenosylmethioninedependentmethyltransferasesintheanhydrobioticmidge
_version_ 1724582743762796544